Biomass, Environment, Adaptation and Metabolism

Xue Z, Ferrand M, Gilbault E, Zurfluh O, Clément G, Marmagne A, Huguet S, Jiménez-Gómez JM, Krapp A, Meyer C, Loudet O (2024). Natural variation in response to combined water and nitrogen deficiencies in Arabidopsis. Plant Cell, koae173. PubMed | DOI

D'Alessandro S, Velay F, Lebrun R, Zafirov D, Mehrez M, Romand S, Saadouni R, Forzani C, Citerne S, Montane MH, Robaglia C, Menand B, Meyer C, Field B (2024). Posttranslational regulation of photosynthetic activity via the TOR kinase in plants. Sci Adv, 10(25):eadj3268. PubMed | DOI

González Ortega-Villaizán A, King E, Patel MK, Pérez-Alonso MM, Scholz SS, Sakakibara H, Kiba T, Kojima M, Takebayashi Y, Ramos P, Morales-Quintana L, Breitenbach S, Smolko A, Salopek-Sondi B, Bauer N, Ludwig-Müller J, Krapp A, Oelmüller R, Vicente-Carbajosa J, Pollmann S (2024). The endophytic fungus Serendipita indica affects auxin distribution in Arabidopsis thaliana roots through alteration of auxin transport and conjugation to promote plant growth. Plant Cell Environ, doi: 10.1111/pce.14989. PubMed | DOI

Renou J, Li D, Lu J., Zhang B, Gineau E, Ye Y, Shi J, Voxeur A, Akary E, Marmagne A, Gonneau M, Uyttewaal M, Höfte H, Zhao Y, Vernhettes S (2024). A cellulose synthesis inhibitor affects cellulose synthase complex secretion and cortical microtubule dynamics. Plant Physiol, kiae232. PubMed | DOI

Dhahak A, Cézard L, Baumberger S, Peixinho J (2024). Kinetic, products and shrinkage for the pyrolysis of flax fibers. Journal of Analytical and Applied Pyrolysis, Vol 180, 106538. DOI

Nisler J, Klimeš P, Koncitíková R, Kadlecová A, Voller J, Chalaki M, Karampelias M, Murvanidze N, Werbrouck SPO, Kopecný D, Havlícek L, De Diego N, Briozzo P, Moréra S, Zalabák D, Spíchal L (2024). Cytokinin oxidase/dehydrogenase inhibitors: progress towards agricultural practice. J Exp Bot, erae239. PubMed | DOI

Bhati KK, Luong AM, Dittrich-Domergue F, D'Andrea S, Moreau P, Batoko H (2024). Possible crosstalk between the Arabidopsis TSPO-related protein and the transcription factor WRINKLED1. Biochimie, S0300-9084(24)00105-6. PubMed | DOI

Piedrahita-Rodríguez S, Alzate-Ramírez AF, Baumberger S, Cézard L, Ortiz-Sánchez M, Garcia DAE, Arenas AMZ, Moustakas K, Alzate CAC (2024). Strategy for the analysis of lignocellulosic biomass to select a viable transformation route in the Colombian context. Environ Sci Pollut Res Int, 2024 May 2. PubMed | DOI

Goelzer A, Rajjou L, Chardon F, Loudet O, Fromion V (2024). Resource allocation modeling for autonomous prediction of plant cell phenotypes. Metab Eng, S1096-7176(24)00054-5. PubMed | DOI

Valifard M, Khan A, Berg J, Le Hir R, Pommerrenig B, Neuhaus HE, Keller I (2024). Carbohydrate distribution via SWEET17 is critical for Arabidopsis inflorescence branching under drought. J Exp Bot, erae135. PubMed | DOI

Luo J, Have M, Soulay F, Balliau T, Clément G, Tellier F, Zivy M, Avice JC, Masclaux-Daubresse C (2024). Multi-omics analyses of sid2 mutant reflect the need of isochorismate synthase ICS1 to cope with sulfur limitation in Arabidopsis thaliana. Plant J, doi: 10.1111/tpj.16702. PubMed | DOI

Rashid GMM, Rivière G, Cottyn B, Majira A, Cézard L, Sodré V, Lam R, Fairbairn JA, Baumberger S, Bugg TDH (2024). Ether Bond Cleavage of a Phenylcoumaran β-5 Lignin Model Compound and Polymeric Lignin Catalysed by a LigE-type Etherase from Agrobacterium sp. Chembiochem, e202400132. PubMed | DOI

Ducloy A, Azzopardi M, Ivsic C, Cueff G, Sourdeval D, Charif D, Cacas JL (2024). A transcriptomic dataset for investigating the Arabidopsis Unfolded Protein Response under chronic, proteotoxic endoplasmic reticulum stress. Data Brief, 53:110243. PubMed | DOI

Artins A, Martins MCM, Meyer C, Fernie AR, Caldana C (2024). Sensing and regulation of C and N metabolism - novel features and mechanisms of the TOR and SnRK1 signaling pathways. Plant J, doi: 10.1111/tpj.16684. PubMed | DOI

Barreda L, Brosse C, Boutet S, Perreau F, Rajjou L, Lepiniec L, Corso M (2024). Specialized metabolite modifications in Brassicaceae seeds and plants: diversity, functions and related enzymes. Nat Prod Rep, doi: 10.1039/d3np00043e. PubMed | DOI

Lardos M, Marmagne A, Bonadé Bottino N, Caris Q, Béal B, Chardon F, Masclaux-Daubresse C (2024). Discovery of the biostimulant effect of asparagine and glutamine on plant growth in Arabidopsis thaliana. Front Plant Sci, 14:1281495. PubMed | DOI

Guillory A, Lopez Obando M, Bouchenine K, Le Bris P, Lécureuil A, Pillot JP, Steinmetz V, Boyer FD, Rameau C, De Saint Germain A, Bonhomme S (2024). SUPPRESSOR OF MAX2 1-LIKE (SMXL) homologs are MAX2-dependent repressors of Physcomitrium patens growth. Plant Cell, koae009. PubMed | DOI

Hadjiefstathiou C, Manière A, Attia J, Pion F, Ducrot PH, Grisel M, Gore E (2024). Sensory signature of lignins, new generation of bio-based ingredients in cosmetics. Int J Biol Macromol, 260(1):129399. PubMed | DOI

Gissot L, Fontaine F, Kelemen Z, Dao O, Bouchez I, Deruyffelaere C, Winkler M, Da Costa A, Pierre F, Meziadi C, Faure JD, Froissard M (2023). E and M SARS-CoV-2 membrane protein expression and enrichment with plant lipid droplets. Biotechnol J, e2300512. PubMed | DOI

Svietlova N, Reichelt M, Zhyr L, Majumder A, Scholz SS, Grabe V, Krapp A, Oelmüller R, Mithofer A (2023). The Beneficial Fungus Mortierella hyalina Modulates Amino Acid Homeostasis in Arabidopsis under Nitrogen Starvation. Int J Mol Sci, 24(22):16128. PubMed | DOI

Chowdhury NB, Simons-Senftle M, Decouard B, Quilleré I, Rigault M, Sajeevan KA, Acharya B, Chowdhury R, Hirel B, Dellagi A, Maranas CD, Saha R (2023). A multi-organ maize metabolic model connects temperature stress with energy production and reducing power generation. iScience, 26(12):108400. PubMed | DOI

Scholz SS, Barth E, Clément G, Marmagne A, Ludwig-Müller J, Sakakibara H, Kiba T, Vicente-Carbajosa J, Pollmann S, Krapp A, Oelmüller R (2023). The Root-Colonizing Endophyte Piriformospora indica Supports Nitrogen-Starved Arabidopsis thaliana Seedlings with Nitrogen Metabolites. Int J Mol Sci, 24(20):15372. PubMed | DOI

Aoi Y, Benamar A, Saulnier L, Ralet MC, North HM (2023). Biochemical data documenting variations in mucilage polysaccharides in a range of glycosyltransferase mutants. Sci Data, 10(1):702. PubMed | DOI

Chen X, Ferchaud N, Briozzo P, Machover D, Simonson T (2023). PLP-Dependent Enzyme Methionine γ-Lyase: Insights into the Michaelis Complex from Molecular Dynamics and Free Energy Simulations. Biochemistry, doi: 10.1021/acs.biochem.3c00355. PubMed | DOI

Lailheugue V, Merlin I, Boutet S, Perreau F, Pouvreau JB, Delgrange S, Ducrot PH, Cottyn B, Mouille G, Lauvergeat V (2023). Vitislactone, a non-canonical strigolactone exudated by grapevine rootstocks in response to nitrogen starvation. Phytochemistry, 215:113837. PubMed | DOI

Piedrahita-Rodríguez S, Baumberger S, Cézard L, Poveda-Giraldo J, Alzate-Ramírez AF, Alzate CAC (2023). Comparative Analysis of Trifluoracetic Acid Pretreatment for Lignocellulosic Materials. Materials, 16(15):5502. PubMed | DOI

Sarieddine A, Hadjiefstathiou C, Majira A, Pion F, Ducrot PH (2023). Biocatalytic selective acylation of technical lignins: a new route for the design of new biobased additives for industrial formulations. Front Chem, 11:1239479. PubMed | DOI

Terce Laforgue T, Lothier J, Limami AM, Rouster J, Lea PJ, Hirel B (2023). The Key Role of Glutamate Dehydrogenase 2 (GDH2) in the Control of Kernel Production in Maize (Zea mays L.). Plants, 12(14):2612. PubMed | DOI

Bouchnak I, Coulon D, Salis V, D'Andrea S, Bréhélin C (2023). Lipid droplets are versatile organelles involved in plant development and plant response to environmental changes. Front Plant Sci, 14:1193905. PubMed | DOI

Malric-Garajova S, Fortuna F, Pion F, Martin E, Thottathil A, Guillemain A, Doan A, Lomascolo A, Faulds CB, Baumberger S, Foulon L, Chabbert B, de Baynast H, Dubessay P, Audonnet F, Bertrand E, Sciara G, Tapin-Lingua S, Ducrot PH, Michaud P, Aguié-Béghin V, Record E (2023). Modification of a Marine Pine Kraft Lignin Sample by Enzymatic Treatment with a Pycnoporus cinnabarinus Laccase. Molecules, 28(12):4873. PubMed | DOI

Voronezhskaya V, Volkova PY, Bitarishvili SV, Shesterikova E, Podlutskii M, Clément G, Meyer C, Turqueto Duarte G, Kudin M, Garbaruk D, Turchin L, Kazakova EA (2023). Multi-Omics Analysis of Vicia cracca Responses to Chronic Radiation Exposure in the Chernobyl Exclusion Zone. Plants, 12(12):2318. PubMed | DOI

Demirjian C, Razavi N, Yu G, Mayjonade B, Zhang L, Lonjon F, Chardon F, Carrere S, Gouzy J, Genin S, Macho AP, Roux F, Berthomé R, Vailleau F (2023). An atypical NLR gene confers bacterial wilt susceptibility in Arabidopsis. Plant Commun, 100607. PubMed | DOI

Beveridge CA, Rameau C, Wijerathna-Yapa A (2023). Learnings from a century of apical dominance research. J Exp Bot, erad137. PubMed | DOI

Cheng YH, Durand M, Bréhaut V, Hsu FC, Kelemen Z, Texier Y, Krapp A, Tsay YF (2023). Interplay Between NIN-LIKE PROTEINs 6 and 7 in Nitrate Signaling. Plant Physiol, kiad242. PubMed | DOI

Ingargiola C, Jéhanno I, Forzani C, Marmagne A, Broutin J, Clément G, Leprince AS, Meyer C (2023). The Arabidopsis Target of Rapamycin (TOR) kinase regulates ammonium assimilation and glutamine metabolism. Plant Physiol, kiad216. PubMed | DOI

Limami AM, Cukier C, Hirel B (2023). 15N-labelling of Leaves Combined with GC-MS Analysis as a Tool for Monitoring the Dynamics of Nitrogen Incorporation into Amino Acids. Methods Mol Biol, 2642:151-161. PubMed | DOI

Soulhat C, Wehbi H, Fierlej Y, Berquin P, Girin T, Hilson P, Bouchabké-Coussa O (2023). Fast-track transformation and genome editing in Brachypodium distachyon. Plant Methods, 19(1):31. PubMed | DOI

Main O, Jacquemot MP, Griveau Y, Guillaume S, Demonceaux C, Lopez-Marnet PL, Rey S, Fargier S, Sartre P, Montagnier C, Uijttewaal A, Mangel N, Meunier F, Reymond M, Méchin V, Coursol S (2023). Precise control of water stress in the field reveals different response thresholds for forage yield and digestibility of maize hybrids. Front Plant Sci, 14:1142462. PubMed | DOI

Baud S, Corso M, Debeaujon I, Dubreucq B, Job D, Marion-Poll A, Miquel M, North HM, Rajjou L, Lepiniec L (2023). Recent progress in molecular genetics and omics-driven research in seed biology. C R Biol, 345(4):61-110. PubMed | DOI

Bělíček J, Ľuptáková, Kopecný D, Frömmel J, Vigouroux A, Ćavar Zeljković S, Jagic F, Briozzo P, Kopečný DJ, Tarkowski P, Nisler J, De Diego N, Moréra S, Kopecná M (2023). Biochemical and structural basis of polyamine, lysine and ornithine acetylation catalyzed by spermine/spermidine N-acetyl transferase in moss and maize. Plant J, doi: 10.1111/tpj.16148. PubMed | DOI

Vachon J, Assad-Alkhateb D, de Araujo Hsia L, Lora JH, Baumberger S (2023). Effect of compatibilizers on polyethylene-eucalyptus lignin blends. J Appl Polym Sci, 140: e53695. DOI

Durand M, Bréhaut V, Clément G, Kelemen Z, Macé J, Feil R, Duville G, Launay-Avon A, Paysant-Le Roux C, Lunn JE, Roudier F, Krapp A (2023). The Arabidopsis transcription factor NLP2 regulates early nitrate responses and integrates nitrate assimilation with energy and carbon skeleton supply. Plant Cell, koad025. PubMed | DOI

PlantACT [...], Chardon F, Krapp A (2023). PlantACT! - how to tackle the climate crisis. Trends Plant Sci, S1360-1385(23)00024-9. PubMed | DOI

Shafiei R, Hooper M, Mcclellan C, Oakey H, Stephens J, Lapierre C, Tsuji Y, Goeminne G, Vanholme R, Boerjan W, Ralph J, Halpin C (2023). Downregulation of barley ferulate 5-hydroxylase dramatically alters straw lignin structure without impact on mechanical properties. Front Plant Sci, 13:1125003. PubMed | DOI

de L TovillaCoutino M, Passot S, Trelea IC, Ropers MH, Gohon Y, Fonseca F (2023). Multi-objective optimization of frozen and freeze-dried Lactobacillus delbrueckii subsp. bulgaricus CFL1 production via the modification of fermentation conditions. J Appl Microbiol, lxad003. PubMed | DOI

Mazoyon C, Hirel B, Pecourt A, Catterou M, Gutierrez L, Sarazin A, Dubois F, Duclercq J (2023). Sphingomonas sediminicola Is an Endosymbiotic Bacterium Able to Induce the Formation of Root Nodules in Pea (Pisum sativum L.) and to Enhance Plant Biomass Production. Microorganisms, 11(1):199. PubMed | DOI

Kunkowska AB, Fontana F, Betti F, Soeur R, Beckers GJM, Meyer C, De Jaeger G, Weits DA, Loreti E, Perata P (2023). Target of rapamycin signaling couples energy to oxygen sensing to modulate hypoxic gene expression in Arabidopsis. Proc Natl Acad Sci,120(3):e2212474120. PubMed | DOI

Dourmap C, Marmagne A, Lebreton S, Clément G, Guivarc'h A, Savoure A, Masclaux-Daubresse C (2022). Carbon and nitrogen remobilization during seed filling is strongly impaired in pyrroline-5-carboxylate dehydrogenase mutant. J Exp Bot, erac499. PubMed | DOI

Limami A, Hirel B, Lothier J (2022). Does Potassium (K+) Contribute to High-Nitrate (NO3-) Weakening of a Plant's Defense System against Necrotrophic Fungi?. Int J Mol Sci, 23(24):15631. PubMed | DOI

Nagel M, Arc E., Rajjou L, Cueff G, Bailly M, Clément G, Sanchez-Vicente I, Bailly C, Seal CE, Roach T, Rolletschek H, Lorenzo O, Borner A, Kranner I (2022). Impacts of drought and elevated temperature on the seeds of malting barley. Front Plant Sci, 13:1049323. PubMed | DOI