Publications

Silva JVC, Legland D, Cauty C, Kolotuev I, Floury J (2015). Characterization of the microstructure of dairy systems using automated image analysis. Food Hydrocolloids, 44:360-371. PubMed | DOI

Szakonyi D, Van Landeghem S, Baerenfaller K, Baeyens L, Blomme J, Casanova-Saez R, De Bodt S, Esteve-Bruna D, Fiorani F, Gonzalez N, Grønlund J, Immink R, Jover-Gil S, Kuwabara A, Muñoz-Nortes T, Van Dijk ADJ, Wilson-Sánchez D, Buchanan-Wollaston V, Angenent G, Van De Peer Y, Inzé D, Micol JL, Gruissem W, Walsh S, Hilson P (2015). The KnownLeaf literature curation system captures knowledge about Arabidopsis leaf growth and development and facilitates integrated data mining. Current Plant Biology, 2:1-11. PubMed | DOI

Tepfer M, Jacquemond M, Garcia-Arenal F (2015). A critical evaluation of whether recombination in virus-resistant transgenic plants will lead to the emergence of novel viral diseases. New Phytol, 207:536-541. PubMed | DOI

Terce-Laforgue T, Clément G, Marchi L, Restivo FM, Lea PJ, Hirel B (2015). Resolving the Role of Plant NAD-Glutamate Dehydrogenase: III. Overexpressing Individually or Simultaneously the Two Enzyme Subunits Under Salt Stress Induces Changes in the Leaf Metabolic Profile and Increases Plant Biomass Production. Plant Cell Physiol, 56:1918-1929. PubMed | DOI

Thazar-Poulot N, Miquel M, Fobis-Loisy I, Gaude T (2015). Peroxisome extensions deliver the Arabidopsis SDP1 lipase to oil bodies. Proc Natl Acad Sci U S A, 112:4158-4163. PubMed | DOI

Vaucheret H (2015). Gene silencing: Mode of miRNA biogenesis matters. Nat Plants, 1:15019. PubMed | DOI

Voiniciuc C, Schmidt MH, Berger A, Yang B, Ebert B, Scheller HV, North HM, Usadel B, Gunl M (2015). MUCILAGE-RELATED10 Produces Galactoglucomannan That Maintains Pectin and Cellulose Architecture in Arabidopsis Seed Mucilage. Plant Physiol, 169:403-420. PubMed | DOI

Voxeur A, Wang Y, Sibout R (2015). Lignification: different mechanisms for a versatile polymer. Curr Opin Plant Biol, 23:83-90. PubMed | DOI

Wang Y, Bouchabké-Coussa O, Le Bris P, Antelme S, Soulhat C, Gineau E, Dalmais M, Bendahmane A, Morin H, Mouille G, Legée F, Cézard L, Lapierre C, Sibout R (2015). LACCASE5 is required for lignification of the Brachypodium distachyon Culm. Plant Physiol, 168:192-204. PubMed | DOI

Worden N, Wilkop TE, Esteve VE, Jeannotte R, Lathe R, Vernhettes S, Weimer B, Hicks G, Alonso J, Labavitch J, Persson S, Ehrhardt D, Drakakaki G (2015). CESA TRAFFICKING INHIBITOR inhibits cellulose deposition and interferes with the trafficking of cellulose synthase complexes and their associated proteins KORRIGAN1 and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN1. Plant Physiol, 167:381-393. PubMed | DOI

Xu W, Dubos C, Lepiniec L (2015). Transcriptional control of flavonoid biosynthesis by MYB-bHLH-WDR complexes. Trends Plant Sci, 20:176-185. PubMed | DOI

Yoneyama T, Fujimori T, Yanagisawa S, Hase T, Suzuki A (2015). 15N Tracing Studies on In Vitro Reactions of Ferredoxin-Dependent Nitrite Reductase and Glutamate Synthase Using Reconstituted Electron Donation Systems. Plant Cell Physiol, 56:1154-1161. PubMed | DOI

Yu A, Saudemont B, Bouteiller N, Elvira-Matelot E, Lepere G, Parent JS, Morel JB, Cao J, Elmayan T, Vaucheret H (2015). Second-Site Mutagenesis of a Hypomorphic argonaute1 Allele Identifies SUPERKILLER3 as an Endogenous Suppressor of Transgene Posttranscriptional Gene Silencing. Plant Physiol, 169:1266-1274. PubMed | DOI

Amiour N, Imbaud S, Clément G, Agier N, Zivy M, Valot B, Balliau T, Quilleré I, Terce-Laforgue T, Dargel-Graffin C, Hirel B (2014). An integrated "omics" approach to the characterization of maize (Zea mays L.) mutants deficient in the expression of two genes encoding cytosolic glutamine synthetase. BMC Genomics, 15:1005. PubMed | DOI

Anca IA, Fromentin J, Bui QT, Mhiri C, Grandbastien MA, Simon-Plas F (2014). Different tobacco retrotransposons are specifically modulated by the elicitor cryptogein and reactive oxygen species. J Plant Physiol, 171:1533-1540. PubMed | DOI

Arnal N, Quadrado M, Simon M, Mireau H (2014). A restorer-of-fertility like pentatricopeptide repeat gene directs ribonucleolytic processing within the coding sequence of rps3-rpl16 and orf240a mitochondrial transcripts in Arabidopsis thaliana. Plant J, 78:134-145. PubMed | DOI

Arnaud N, Pautot V (2014). Ring the BELL and tie the KNOX: roles for TALEs in gynoecium development. Front Plant Sci, 5:93. PubMed | DOI

Avila-Ospina L, Moison M, Yoshimoto K, Masclaux-Daubresse C (2014). Autophagy, plant senescence, and nutrient recycling. J Exp Bot, 65:3799-3811. PubMed | DOI

Ayme L, Baud S, Dubreucq B, Joffre F, Chardot T (2014). Function and localization of the Arabidopsis thaliana diacylglycerol acyltransferase DGAT2 expressed in yeast. PLoS One, 9:e92237. PubMed | DOI

Azman A, Mhiri C, Grandbastien M, Tam S (2014). Transposable elements and the detection of somaclonal variation in plant tissue culture: A review. Malaysian Applied Biology, 43:1-12. PubMed | DOI

Aznar A, Chen NW, Rigault M, Riache N, Joseph D, Desmaele D, Mouille G, Boutet S, Soubigou-Taconnat L, Renou JP, Thomine S, Expert D, Dellagi A (2014). Scavenging iron: a novel mechanism of plant immunity activation by microbial siderophores. Plant Physiol, 164:2167-2183. PubMed | DOI

Barthole G, To A, Marchive C, Brunaud V, Soubigou-Taconnat L, Berger N, Dubreucq B, Lepiniec L, Baud S (2014). MYB118 represses endosperm maturation in seeds of Arabidopsis. Plant Cell, 26:3519-3537. PubMed | DOI

Bastien R, Douady S, Moulia B (2014). A unifying modeling of plant shoot gravitropism with an explicit account of the effects of growth. Front Plant Sci, 5:136. PubMed | DOI

Bellini C, Pacurar DI, Perrone I (2014). Adventitious roots and lateral roots: similarities and differences. Annu Rev Plant Biol, 65:639-666. PubMed | DOI

Boccaccini A, Santopolo S, Capauto D, Lorrai R, Minutello E, Belcram K, Palauqui JC, Costantino P, Vittorioso P (2014). Independent and interactive effects of DOF affecting germination 1 (DAG1) and the Della proteins GA insensitive (GAI) and Repressor of ga1-3 (RGA) in embryo development and seed germination. BMC Plant Biol, 14:200. PubMed | DOI

Bolger A, Scossa F, Bolger ME, Lanz C, Maumus F, Tohge T, Quesneville H, Alseekh S, Sorensen I, Lichtenstein G, Fich EA, Conte M, Keller H, Schneeberger K, Schwacke R, Ofner I, Vrebalov J, Xu Y, Osorio S, Aflitos SA, Schijlen E, Jiménez-Gómez JM, Ryngajllo M, Kimura S, Kumar Ra, Koenig D, Headland LR, Maloof JN, Sinha N, Van Ham RC, Lankhorst RK, Mao L, Vogel A, Arsova B, Panstruga R, Fei Z, Rose JK, Zamir D, Carrari F, Giovannoni JJ, Weigel D, Usadel B, Fernie AR (2014). The genome of the stress-tolerant wild tomato species Solanum pennellii. Nat Genet, 46:1034-1038. PubMed | DOI

Bomblies K, Loudet O (2014). Genome studies and molecular genetics: Genomic approaches to understanding evolution, development and the plant phenome. Curr Opin Plant Biol, 18:v-vi. PubMed | DOI

Boron AK, Van Orden J, Nektarios Markakis M, Mouille G, Adriaensen D, Verbelen JP, Höfte H, Vissenberg K (2014). Proline-rich protein-like PRPL1 controls elongation of root hairs in Arabidopsis thaliana. J Exp Bot, 65:5485-5495. PubMed | DOI

Boudaoud A, Burian A, Borowska-Wykret D, Uyttewaal M, Wrzalik R, Kwiatkowska D, Hamant O (2014). FibrilTool, an ImageJ plug-in to quantify fibrillar structures in raw microscopy images. Nat Protoc, 9:457-463. PubMed | DOI

Bourion V, Martin C, De Larambergue H, Jacquin F, Aubert G, Martin-Magniette ML, Balzergue S, Lescure G, Citerne S, Lepetit M, Munier-Jolain N, Salon C, Duc G (2014). Unexpectedly low nitrogen acquisition and absence of root architecture adaptation to nitrate supply in a Medicago truncatula highly branched root mutant. J Exp Bot, 65:2365-2380. PubMed | DOI

Boyer FD, De Saint Germain A, Pouvreau JB, Clavé G, Pillot JP, Roux A, Rasmussen A, Depuydt S, Lauressergues D, Frei Dit Frey N, Heugebaert TS, Stevens CV, Geelen D, Goormachtig S, Rameau C (2014). New strigolactone analogs as plant hormones with low activities in the rhizosphere. Mol Plant, 7:675-690. PubMed | DOI

Brousse C, Liu Q, Beauclair L, Deremetz A, Axtell MJ, Bouché N (2014). A non-canonical plant microRNA target site. Nucleic Acids Res, 42:5270-5279. PubMed | DOI

Burguet J, Andrey P (2014). Statistical comparison of spatial point patterns in biological imaging. PLoS One, 9:e87759. PubMed | DOI

Catalan P, Chalhoub B, Chochois V, Garvin DF, Hasterok R, Manzaneda AJ, Mur LA, Pecchioni N, Rasmussen SK, Vogel JP, Voxeur A (2014). Update on the genomics and basic biology of Brachypodium: International Brachypodium Initiative (IBI). Trends Plant Sci, 19:414-418. PubMed | DOI

Chardin C, Girin T, Roudier F, Meyer C, Krapp A (2014). The plant RWP-RK transcription factors: key regulators of nitrogen responses and of gametophyte development. J Exp Bot, 65:5577-5587. PubMed | DOI

Chardon F, Jasinski S, Durandet M, Lécureuil A, Soulay F, Bedu M, Guerche P, Masclaux-Daubresse C (2014). QTL meta-analysis in Arabidopsis reveals an interaction between leaf senescence and resource allocation to seeds. J Exp Bot, 65:3949-3962. PubMed | DOI

Charlot F, Chelysheva L, Kamisugi Y, Vrielynck N, Guyon A, Epert A, Le Guin S, Schaefer DG, Cuming AC, Grelon M, Nogué F (2014). RAD51B plays an essential role during somatic and meiotic recombination in Physcomitrella. Nucleic Acids Res, 42:11965-11978. PubMed | DOI

Chazal R, Robert P, Durand S, Devaux MF, Saulnier L, Lapierre C, Guillon F (2014). Investigating lignin key features in maize lignocelluloses using infrared spectroscopy. Appl Spectrosc, 68:1342-1347. PubMed | DOI

Coustham V, Vlad D, Deremetz A, Gy I, Cubillos FA, Kerdaffrec E, Loudet O, Bouché N (2014). SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1. PLoS One, 9:e84687. PubMed | DOI

Cubillos FA, Stegle O, Grondin C, Canut M, Tisne S, Gy I, Loudet O (2014). Extensive cis-regulatory variation robust to environmental perturbation in Arabidopsis. Plant Cell, 26:4298-4310. PubMed | DOI

Dahan J, Tcherkez G, Macherel D, Benamar A, Belcram K, Quadrado M, Arnal N, Mireau H (2014). Disruption of the CYTOCHROME C OXIDASE DEFICIENT1 gene leads to cytochrome c oxidase depletion and reorchestrated respiratory metabolism in Arabidopsis. Plant Physiol, 166:1788-1802. PubMed | DOI

David LC, Dechorgnat J, Berquin P, Routaboul JM, Debeaujon I, Daniel-Vedele F, Ferrario-Méry S (2014). Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7. J Exp Bot, 65:885-893. PubMed | DOI

Del Prete S, Arpòn J, Sakai K, Andrey P, Gaudin V (2014). Nuclear architecture and chromatin dynamics in interphase nuclei of Arabidopsis thaliana. Cytogenet Genome Res, 143:28-50. PubMed | DOI

Denay G, Creff A, Moussu S, Wagnon P, Thévenin J, Gerentes MF, Chambrier P, Dubreucq B, Ingram G (2014). Endosperm breakdown in Arabidopsis requires heterodimers of the basic helix-loop-helix proteins ZHOUPI and INDUCER OF CBP EXPRESSION 1. Development, 141:1222-1227. PubMed | DOI

Dobler R, Rogell B, Budar F, Dowling DK (2014). A meta-analysis of the strength and nature of cytoplasmic genetic effects. J Evol Biol, 27:2021-2034. PubMed | DOI

Dubos C, Kelemen Z, Sebastian A, Bulow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R (2014). Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. BMC Genomics, 15:317. PubMed | DOI

Dugail I, Kalopissis A, Miquel M, Rainteau D, Zachowski A, Forest C (2014). Lipids in metabolic diseases. Biochimie, 96:1-2. PubMed | DOI

Dumont M, Lehner A, Bouton S, Kiefer-Meyer MC, Voxeur A, Pelloux J, Lerouge P, Mollet JC (2014). The cell wall pectic polymer rhamnogalacturonan-II is required for proper pollen tube elongation: implications of a putative sialyltransferase-like protein. Ann Bot, 114:1177-1188. PubMed | DOI

Duroc Y, Lemhemdi A, Larcheveque C, Hurel A, Cuacos M, Cromer L, Horlow C, Armstrong SJ, Chelysheva L, Mercier R (2014). The kinesin AtPSS1 promotes synapsis and is required for proper crossover distribution in meiosis. PLoS Genet, 10:e1004674. PubMed | DOI

Fagard M, Launay A, Clément G, Courtial J, Dellagi A, Farjad M, Krapp A, Soulie MC, Masclaux-Daubresse C (2014). Nitrogen metabolism meets phytopathology. J Exp Bot, 65:5643-5656. PubMed | DOI