Publications

Adler S, Mouille G, Fock-Bastide I, Citerne S, Noirot M (2015). Comparison between Coffea arabica L. ‘Laurina’ and C. arabica ‘Bourbon’ seedlings grown in daylight or darkness for their polysaccharidic cell wall composition and caffeine and chlorogenic acid contents. Trees, 30:665-674. PubMed | DOI

Adler S, Noirot M, Fock-Bastide I, Citerne S, Mouille G (2015). Variations in cell wall monosaccharide composition during seed development in Coffea arabica L. Comparison between Coffea arabica var. Bourbon and Coffea arabica var. Laurina. Trees, 29:1871-1881. PubMed | DOI

Aguié-Béghin V, Foulon L, Soto P, Crônier D, Corti E, Legée F, Cézard L, Chabbert B, Maillard MN, Huijgen WJ, Baumberger S (2015). Use of food and packaging model matrices to investigate the antioxidant properties of biorefinery grass lignins. J Agric Food Chem, 63:10022-10031. PubMed | DOI

Anne P, Azzopardi M, Gissot L, Beaubiat S, Hématy K, Palauqui JC (2015). OCTOPUS Negatively Regulates BIN2 to Control Phloem Differentiation in Arabidopsis thaliana. Curr Biol, 25:2584-2590. PubMed | DOI

Avila-Ospina L, Marmagne A, Talbotec J, Krupinska K, Masclaux-Daubresse C (2015). The identification of new cytosolic glutamine synthetase and asparagine synthetase genes in barley (Hordeum vulgare L.), and their expression during leaf senescence. J Exp Bot, 66:2013-2026. PubMed | DOI

Ayme L, Jolivet P, Nicaud JM, Chardot T (2015). Molecular Characterization of the Elaeis guineensis Medium-Chain Fatty Acid Diacylglycerol Acyltransferase DGAT1-1 by Heterologous Expression in Yarrowia lipolytica. PLoS One, 10:e0143113. PubMed | DOI

Aznar A, Chen NW, Thomine S, Dellagi A (2015). Immunity to plant pathogens and iron homeostasis. Plant Sci, 240:90-97. PubMed | DOI

Aznar A, Dellagi A (2015). New insights into the role of siderophores as triggers of plant immunity: what can we learn from animals?. J Exp Bot, 66:3001-3010. PubMed | DOI

Aznar A, Patrit O, Berger A, Dellagi A (2015). Alterations of iron distribution in Arabidopsis tissues infected by Dickeya dadantii. Mol Plant Pathol, 16:521-528. PubMed | DOI

Barbara I, Flourat A, Allais F (2015). Renewable polymers derived from ferulic acid and biobased diols via ADMET. European Polymer Journal, 62:236-243. PubMed | DOI

Barbier F, Péron T, Lecerf M, Perez-Garcia MD, Barriere Q, Rolcik J, Boutet S, Citerne S, Lemoine R, Porcheron B, Roman H, Leduc N, Le Gourrierec J, Bertheloot J, Sakr S (2015). Sucrose is an early modulator of the key hormonal mechanisms controlling bud outgrowth in Rosa hybrida. J Exp Bot, 66:2569-2582. PubMed | DOI

Bastien R, Douady S, Moulia B (2015). A unified model of shoot tropism in plants: photo-, gravi- and Propio-ception. PLoS Comput Biol, 11:e1004037. PubMed | DOI

Bensussan M, Lefebvre V, Ducamp A, Trouverie J, Gineau E, Fortabat MN, Guillebaux A, Baldy A, Naquin D, Herbette S, Lapierre C, Mouille G, Horlow C, Durand-Tardif M (2015). Suppression of Dwarf and irregular xylem Phenotypes Generates Low-Acetylated Biomass Lines in Arabidopsis. Plant Physiol, 168:452-463. PubMed | DOI

Boucher D, Vu T, Bain AL, Tagliaro-Jahns M, Shi W, Lane SW, Khanna KK (2015). Ssb2/Nabp1 is dispensable for thymic maturation, male fertility, and DNA repair in mice. FASEB J, 29:3326-3334. PubMed | DOI

Bouchez I, Pouteaux M, Canonge M, Genet M, Chardot T, Guillot A, Froissard M (2015). Regulation of lipid droplet dynamics in Saccharomyces cerevisiae depends on the Rab7-like Ypt7p, HOPS complex and V1-ATPase. Biol Open, 4:764-775. PubMed | DOI

Boulard C, Bardet M, Chardot T, Dubreucq B, Gromova M, Guillermo A, Miquel M, Nesi N, Yen-Nicolay S, Jolivet P (2015). The structural organization of seed oil bodies could explain the contrasted oil extractability observed in two rapeseed genotypes. Planta, 242:53-68. PubMed | DOI

Bourcier De Carbon C, Thurotte A, Wilson A, Perreau F, Kirilovsky D (2015). Biosynthesis of soluble carotenoid holoproteins in Escherichia coli. Sci Rep, 5:9085. PubMed | DOI

Burge G, Flourat A, Pollet B, Spinnler H, Allais F (2015). 3-Hydroxypropionaldehyde (3-HPA) quantification by HPLC using a synthetic acrolein-free 3-hydroxypropionaldehyde system as analytical standard. RSC Advances, 5:92619-92627. PubMed | DOI

Burge G, Saulou-Berion C, Moussa M, Pollet B, Flourat A, Allais F, Athes V, Spinnler HE (2015). Diversity of Lactobacillus reuteri Strains in Converting Glycerol into 3-Hydroxypropionic Acid. Appl Biochem Biotechnol, 177:923-939. PubMed | DOI

Casacuberta JM, Devos Y, Du Jardin P, Ramon M, Vaucheret H, Nogué F (2015). Biotechnological uses of RNAi in plants: risk assessment considerations. Trends Biotechnol, 33:145-147. PubMed | DOI

Cayla T, Batailler B, Le Hir R, Revers F, Anstead JA, Thompson GA, Grandjean O, Dinant S (2015). Live imaging of companion cells and sieve elements in Arabidopsis leaves. PLoS One, 10:e0118122. PubMed | DOI

Cottyn B, Rivard M, Majira A, Beauhaire J, Allais F, Martens T, Baumberger S, Ducrot PH (2015). Comparative electrochemical study on monolignols and dimers relevant for the comprehension of the lignification process. Phytochemistry Letters, 13:280-285. PubMed | DOI

Coursol S, Fromentin J, Noirot E, Briere C, Robert F, Morel J, Liang YK, Lherminier J, Simon-Plas F (2015). Long-chain bases and their phosphorylated derivatives differentially regulate cryptogein-induced production of reactive oxygen species in tobacco (Nicotiana tabacum) BY-2 cells. New Phytol, 205:1239-1249. PubMed | DOI

De Cuyper C, Fromentin J, Yocgo RE, De Keyser A, Guillotin B, Kunert K, Boyer FD, Goormachtig S (2015). From lateral root density to nodule number, the strigolactone analogue GR24 shapes the root architecture of Medicago truncatula. J Exp Bot, 66:137-146. PubMed | DOI

De Klein N, Magnani E, Banf M, Rhee SY (2015). microProtein Prediction Program (miP3): A Software for Predicting microProteins and Their Target Transcription Factors. Int J Genomics, 2015:734147. PubMed | DOI

Del Prete S, Mikulski P, Schubert D, Gaudin V (2015). One, Two, Three: Polycomb Proteins Hit All Dimensions of Gene Regulation. Genes, 6:520-542. PubMed | DOI

Deruyffelaere C, Bouchez I, Morin H, Guillot A, Miquel M, Froissard M, Chardot T, D'Andrea S (2015). Ubiquitin-Mediated Proteasomal Degradation of Oleosins is Involved in Oil Body Mobilization During Post-Germinative Seedling Growth in Arabidopsis. Plant Cell Physiol, 56:1374-1387. PubMed | DOI

Dobrovolskaya O, Pont C, Sibout R, Martinek P, Badaeva E, Murat F, Chosson A, Watanabe N, Prat E, Gautier N, Gautier V, Poncet C, Orlov YL, Krasnikov AA, Berges H, Salina E, Laikova L, Salse J (2015). FRIZZY PANICLE drives supernumerary spikelets in bread wheat. Plant Physiol, 167:189-199. PubMed | DOI

Draeger C, Ndinyanka Fabrice T, Gineau E, Mouille G, Kuhn BM, Moller I, Abdou MT, Frey B, Pauly M, Bacic A, Ringli C (2015). Arabidopsis leucine-rich repeat extensin (LRX) proteins modify cell wall composition and influence plant growth. BMC Plant Biol, 15:155. PubMed | DOI

Dulermo T, Coze F, Virolle MJ, Méchin V, Baumberger S, Froissard M (2015). Bioconversion of agricultural lignocellulosic residues into branched-chain fatty acids usingStreptomyces lividans. Ocl, 23:A202. PubMed | DOI

Esque J, Urbain A, Etchebest C, De Brevern AG (2015). Sequence-structure relationship study in all-alpha transmembrane proteins using an unsupervised learning approach. Amino Acids, 47:2303-2322. PubMed | DOI

Farace G, Visconti S, Marchive C, Aducci P, Marra M, Trossat-Magnin C (2015). Characterization, functional validation and gene expression patterns of two 14-3-3 isoforms from Vitis vinifera. Vitis, 54:33-40. PubMed | DOI

Fernandez A, Drozdzecki A, Hoogewijs K, Vassileva V, Madder A, Beeckman T, Hilson P (2015). The GLV6/RGF8/CLEL2 peptide regulates early pericycle divisions during lateral root initiation. J Exp Bot, 66:5245-5256. PubMed | DOI

Flourat AL, Peru AaM, Teixeira ARS, Brunissen F, Allais F (2015). Chemo-enzymatic synthesis of key intermediates (S)-?-hydroxymethyl-?,?-butenolide and (S)-?-hydroxymethyl-?-butyrolactone via lipase-mediated Baeyer–Villiger oxidation of levoglucosenone. Green Chemistry, 17:404-412. PubMed | DOI

Francin-Allami M, Merah K, Albenne C, Rogniaux H, Pavlovic M, Lollier V, Sibout R, Guillon F, Jamet E, Larre C (2015). Cell wall proteomic of Brachypodium distachyon grains: A focus on cell wall remodeling proteins. Proteomics, 15:2296-2306. PubMed | DOI

Froissard M, Canonge M, Pouteaux M, Cintrat B, Mohand-Oumoussa S, Guillouet SE, Chardot T, Jacques N, Casaregola S (2015). Lipids containing medium-chain fatty acids are specific to post-whole genome duplication Saccharomycotina yeasts. BMC Evol Biol, 15:97. PubMed | DOI

Fujimoto M, Suda Y, Vernhettes S, Nakano A, Ueda T (2015). Phosphatidylinositol 3-kinase and 4-kinase have distinct roles in intracellular trafficking of cellulose synthase complexes in Arabidopsis thaliana. Plant Cell Physiol, 56:287-298. PubMed | DOI

Galland M, Rajjou L (2015). Regulation of mRNA translation controls seed germination and is critical for seedling vigor. Front Plant Sci, 6:284. PubMed | DOI

Ghorbani S, Lin YC, Parizot B, Fernandez A, Njo MF, Van De Peer Y, Beeckman T, Hilson P (2015). Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays. J Exp Bot, 66:5257-5269. PubMed | DOI

Girard C, Chelysheva L, Choinard S, Froger N, Macaisne N, Lemhemdi A, Mazel J, Crismani W, Mercier R (2015). AAA-ATPase FIDGETIN-LIKE 1 and Helicase FANCM Antagonize Meiotic Crossovers by Distinct Mechanisms. PLoS Genet, 11:e1005369. PubMed | DOI

Girondé A, Etienne P, Trouverie J, Bouchereau A, Le Caherec F, Leport L, Orsel M, Niogret MF, Nesi N, Carole D, Soulay F, Masclaux-Daubresse C, Avice JC (2015). The contrasting N management of two oilseed rape genotypes reveals the mechanisms of proteolysis associated with leaf N remobilization and the respective contributions of leaves and stems to N storage and remobilization during seed filling. BMC Plant Biol, 15:59. PubMed | DOI

Goncalves B, Hasson A, Belcram K, Cortizo M, Morin H, Nikovics K, Vialette-Guiraud A, Takeda S, Aida M, Laufs P, Arnaud N (2015). A conserved role for CUP-SHAPED COTYLEDON genes during ovule development. Plant J, 83:732-742. PubMed | DOI

Grandbastien MA (2015). LTR retrotransposons, handy hitchhikers of plant regulation and stress response. Biochim Biophys Acta, 1849:403-416. PubMed | DOI

Grimault A, Gendrot G, Chaignon S, Gilard F, Tcherkez G, Thévenin J, Dubreucq B, Depege-Fargeix N, Rogowsky PM (2015). Role of B3 domain transcription factors of the AFL family in maize kernel filling. Plant Sci, 236:116-125. PubMed | DOI

Grimault A, Gendrot G, Chamot S, Widiez T, Rabille H, Gerentes MF, Creff A, Thévenin J, Dubreucq B, Ingram GC, Rogowsky PM, Depege-Fargeix N (2015). ZmZHOUPI, an endosperm-specific basic helix-loop-helix transcription factor involved in maize seed development. Plant J, 84:574-586. PubMed | DOI

Hecker A, Brand LH, Peter S, Simoncello N, Kilian J, Harter K, Gaudin V, Wanke D (2015). The Arabidopsis GAGA-Binding Factor BASIC PENTACYSTEINE6 Recruits the POLYCOMB-REPRESSIVE COMPLEX1 Component LIKE HETEROCHROMATIN PROTEIN1 to GAGA DNA Motifs. Plant Physiol, 168:1013-1024. PubMed | DOI

Hepworth SR, Pautot V (2015). Beyond the Divide: Boundaries for Patterning and Stem Cell Regulation in Plants. Front Plant Sci, 6:1052. PubMed | DOI

Höfte H (2015). The yin and yang of cell wall integrity control: brassinosteroid and FERONIA signaling. Plant Cell Physiol, 56:224-231. PubMed | DOI

Hummel M, Dobrenel T, Cordewener JJ, Davanture M, Meyer C, Smeekens SJ, Bailey-Serres J, America TA, Hanson J (2015). Proteomic LC-MS analysis of Arabidopsis cytosolic ribosomes: Identification of ribosomal protein paralogs and re-annotation of the ribosomal protein genes. J Proteomics, 128:436-449. PubMed | DOI

Ilk N, Ding J, Ihnatowicz A, Koornneef M, Reymond M (2015). Natural variation for anthocyanin accumulation under high-light and low-temperature stress is attributable to the ENHANCER OF AG-4 2 (HUA2) locus in combination with PRODUCTION OF ANTHOCYANIN PIGMENT1 (PAP1) and PAP2. New Phytol, 206:422-435. PubMed | DOI