Publications

Guérin A, Levasseur C, Herger A, Renggli D, Sotiropoulos AG, Kadler G, Hou X, Schaufelberger M, Meyer C, Wicker T, Bigler L, Ringli C (2024). Histidine limitation alters plant development and influences the TOR network. J Exp Bot, erae479. PubMed | DOI

Marmagne A, Chardon F, Masclaux-Daubresse C (2024). A tissue-specific rescue strategy reveals the local roles of autophagy in leaves and seeds for resource allocation. Plant Physiol, kiae647. PubMed | DOI

Mori A, Nakagawa S, Suzuki T, Suzuki T., Gaudin V, Matsuura T, Ikeda Y, Tamura K (2024). The importin α proteins IMPA1, IMPA2, and IMPA4 play redundant roles in suppressing autoimmunity in Arabidopsis thaliana. Plant J, doi: 10.1111/tpj.17203. PubMed | DOI

Lee J, Hoon Kang M, Choi DM, Marmagne A, Park J, Lee H, Gwak E, Chan Lee J, Kim JI, Masclaux-Daubresse C, Lim PO (2024). Phytochrome-interacting factors PIF4 and PIF5 directly regulate autophagy during leaf senescence in Arabidopsis. J Exp Bot, erae469. PubMed | DOI

Urrutia M, Blein-Nicolas M, Fernandez O, Bernillon S, Maucourt M, Deborde C, Balliau T, Rabier D, Benard C, Prigent S, Quilleré I, Jacob D, Gibon Y, Zivy M, Giauffret C, Hirel B, Moing A (2024). Identification of metabolic and protein markers representative of the impact of mild nitrogen deficit on agronomic performance of maize hybrids. Metabolomics, 20(6):128. PubMed | DOI

Liang W, Zamarreño AM, Torres-Montilla S, de la Torre A, Totozafy JC, Kaji T, Ueda M, Corso M, Garcia-Mina JM, Solano R, Chini A (2024). dn-OPDA conjugation with amino acids inhibits its phytohormone bioactivity in Marchantia polymorpha. Plant Physiol, kiae610. PubMed | DOI

Aubry E, Clément G, Gilbault E, Dinant S, Le Hir R (2024). Changes in SWEET-mediated sugar partitioning affect photosynthesis performance and plant response to drought. Physiol Plant, 176(6):e14623. PubMed | DOI

Lelas L, Rouffet J, Filachet A, Séchet J, Daviere A, Desprez T, Vernhettes S, Voxeur A (2024). A fungal phospholipase C involved in the degradation of plant glycosylinositol phosphorylceramides during Arabidopsis/Botrytis interaction. Commun Biol, 7(1):1372. PubMed | DOI

Emmenecker C, Pakzad S, Ture F, Guérin J, Hurel A, Chambon A, Girard C, Mercier R, Kumar R (2024). FIGL1 attenuates meiotic interhomolog repair and is counteracted by the RAD51 paralog XRCC2 and the chromosome axis protein ASY1 during meiosis. New Phytol, doi: 10.1111/nph.20181. PubMed | DOI

James M, Masclaux-Daubresse C, Balliau T, Marmagne A, Chardon F, Trouverie J, Etienne P (2024). Multi-scale phenotyping of senescence-related changes in roots of Rapeseed in response to nitrate limitation. J Exp Bot, erae417. PubMed | DOI

Maugarny A, Vialette AC, Adroher B, Sarthou AS, Mathy-Franchet N, Azzopardi M, Nicolas A, Roudier F, Laufs P (2024). MIR164B ensures robust Arabidopsis leaf development by compensating for compromised POLYCOMB REPRESSIVE COMPLEX2 function. Plant Cell, koae260. PubMed | DOI

Regnard S, Otani M, Keruzore M, Teinturier A, Blondel M, Kawakami N, Krapp A, Colcombet J (2024). The MKK3 module integrates nitrate and light signals to modulate secondary dormancy in Arabidopsis thaliana. Proc Natl Acad Sci U S A, 121(40):e2403646121. PubMed | DOI

Drs M, Krupař P, Škrabálková E, Haluška S, Muller K, Potocká A, Brejšková L, Serrano N, Voxeur A, Vernhettes S, Ortmannová J, Caldarescu G, Fendrych M, Potocký M, Žárský V, Pecenkova T (2024). Chitosan stimulates root hair callose deposition, endomembrane dynamics, and inhibits root hair growth. Plant Cell Environ, doi: 10.1111/pce.15111. PubMed | DOI

Routaboul JM, Bellenot C, Olympio A, Clément G, Citerne S, Remblière C, Charvin M, Franke L, Chiarenza S, Vasselon D, Jardinaud MF, Carrere S, Nussaume L, Laufs P, Leonhardt N, Navarro L, Schattat MH, Noël LD (2024). Arabidopsis hydathodes are sites of auxin accumulation and nutrient scavenging. Plant J, 2024 Sep 10. PubMed | DOI

Avezum L, Ollier L, Siguemoto E, Rajjou L, Mestres C (2024). Hydrolysis and diffusion of raffinose oligosaccharides family products in chickpeas, lentils, and beans under different pH and temperature steeping conditions. Food Res Int, 191:114732. PubMed | DOI

Dehaene N, Boussardon C, Andrey P, Charif D, Brandt D, Gilouppe Taillefer C, Nietzel T, Ricou A, Simon M, Tran J, Vezon D, Camilleri C, Arimura SI, Schwarzländer M, Budar F (2024). The mitochondrial orf117Sha gene desynchronizes pollen development and causes pollen abortion in Arabidopsis Sha cytoplasmic male sterility. J Exp Bot, 75(16):4851-4872. PubMed | DOI

Rivière Q, Raskin V, de Melo R, Boutet S, Corso M, Defrance M, Webb AAR, Verbruggen N, Anoman AD (2024). Effects of light regimes on circadian gene co-expression networks in Arabidopsis thaliana. Plant Direct, 8(8):e70001. PubMed | DOI

Romeiro Motta M, Nédélec F, Saville H, Woelken E, Jacquerie C, Pastuglia M, Stolze SC, Van De Slijke E, Böttger L, Belcram K, Nakagami H, De Jaeger G, Bouchez D, Schnittger A (2024). The cell cycle controls spindle architecture in Arabidopsis by activating the augmin pathway. Dev Cell, S1534-5807(24)00484-2. PubMed | DOI

Desaint H, Gigli A, Belny A, Cassan-Wang H, Martinez Y, Vailleau F, Mounet F, Vernhettes S, Berthomé R, Marchetti M (2024). Reshaping the Primary Cell Wall: Dual Effects on Plant Resistance to Ralstonia solanacearum and Heat Stress Response. Mol Plant Microbe Interact, 37(8):619-634. PubMed | DOI

Tavernier EK, Perroud PF, Lockwood E, Nogué F, McDaniel SF (2024). Establishing CRISPR-Cas9 in the sexually dimorphic moss, Ceratodon purpureus. Plant J, doi: 10.1111/tpj.16946. PubMed | DOI

He X, Lopes CD, Pereyra-Bistrain LI, [...], Bouché N, Raynaud C, Latrasse D, Benhamed M (2024). Genetic-epigenetic interplay in the determination of plant 3D genome organization. Nucleic Acids Res, gkae690. PubMed | DOI

Zainu A, Dupaigne P, Bouchouika S, Cau J, Clément JAJ, Auffret P, Ropars V, Charbonnier JB, De Massy B, Mercier R, Kumar R, Baudat F (2024). FIGNL1-FIRRM is essential for meiotic recombination and prevents DNA damage-independent RAD51 and DMC1 loading. Nat Commun, 15(1):7015. PubMed | DOI

Wójcikowska B, Chwiałkowska K, Nowak K, Citerne S, [...], Danuta Gaj M (2024). Transcriptomic profiling reveals histone acetylation-regulated genes involved in somatic embryogenesis in Arabidopsis thaliana. BMC Genomics, 25(1):788. PubMed | DOI

Liu C, Hatzianestis IH, [...], D'Andrea S, [....], Bozhkov PV, Moschou PN (2024). Seed longevity is controlled by metacaspases. Nat Commun, 15(1):6748. PubMed | DOI

Peng S, Rajjou L (2024). Advancing plant biology through deep learning-powered natural language processing. Plant Cell Rep, 43(8):208. PubMed | DOI

Carrere S, Routaboul JM, Savourat P, Bellenot C, López H, Sahoo A, Quiroz Monnens T, Ricou A, Camilleri C, Declerck N, Laufs P, Mercier R, Noël LD (2024). A fully sequenced collection of homozygous EMS mutants for forward and reverse genetic screens in Arabidopsis thaliana. Plant J, doi: 10.1111/tpj.16954. PubMed | DOI

Cromer L, Tiscareño Andrade M, Lefranc S, Chambon A, Hurel A, Brogniez M, Guérin J, Le Masson I, Adam G, Charif D, Andrey P, Grelon M (2024). Rapid meiotic prophase chromosome movements in Arabidopsis thaliana are linked to essential reorganization at the nuclear envelope. Nat Commun, 15(1):5964. PubMed | DOI

An J, Brik-Chaouche R, [...], Bouché N, [....], Benhamed M (2024). An atlas of the tomato epigenome reveals that KRYPTONITE shapes TAD-like boundaries through the control of H3K9ac distribution. Proc Natl Acad Sci U S A, 121(28):e2400737121. PubMed | DOI

Capilla-Pérez L, Solier V, Gilbault E, Lian Q, Goel M, Huettel B, Keurentjes JJ, Loudet O, Mercier R (2024). Enhanced recombination empowers the detection and mapping of Quantitative Trait Loci. Commun Biol, 7(1):829. PubMed | DOI

Xue Z, Ferrand M, Gilbault E, Zurfluh O, Clément G, Marmagne A, Huguet S, Jiménez-Gómez JM, Krapp A, Meyer C, Loudet O (2024). Natural variation in response to combined water and nitrogen deficiencies in Arabidopsis. Plant Cell, koae173. PubMed | DOI

Hu ZL, Wilson-Sánchez D, Bhatia N, Rast-Somssich MI, Wu A, Vlad D, McGuire L, Nikolov LA, Laufs P, Gan X, Laurent S, Runions A, Tsiantis M (2024). A CUC1/auxin genetic module links cell polarity to patterned tissue growth and leaf shape diversity in crucifer plants. Proc Natl Acad Sci, 121(26):e2321877121. PubMed | DOI

D'Alessandro S, Velay F, Lebrun R, Zafirov D, Mehrez M, Romand S, Saadouni R, Forzani C, Citerne S, Montane MH, Robaglia C, Menand B, Meyer C, Field B (2024). Posttranslational regulation of photosynthetic activity via the TOR kinase in plants. Sci Adv, 10(25):eadj3268. PubMed | DOI

Raimondi D, Passemiers A, Verplaetse N, Corso M, Ferrero-Serrano A, Nazzicari N, Biscarini F, Fariselli P, Moreau Y (2024). Biologically meaningful genome interpretation models to address data underdetermination for the leaf and seed ionome prediction in Arabidopsis thaliana. Sci Rep, 14(1):13188. PubMed | DOI

González Ortega-Villaizán A, King E, Patel MK, Pérez-Alonso MM, Scholz SS, Sakakibara H, Kiba T, Kojima M, Takebayashi Y, Ramos P, Morales-Quintana L, Breitenbach S, Smolko A, Salopek-Sondi B, Bauer N, Ludwig-Müller J, Krapp A, Oelmüller R, Vicente-Carbajosa J, Pollmann S (2024). The endophytic fungus Serendipita indica affects auxin distribution in Arabidopsis thaliana roots through alteration of auxin transport and conjugation to promote plant growth. Plant Cell Environ, doi: 10.1111/pce.14989. PubMed | DOI

Renou J, Li D, Lu J., Zhang B, Gineau E, Ye Y, Shi J, Voxeur A, Akary E, Marmagne A, Gonneau M, Uyttewaal M, Höfte H, Zhao Y, Vernhettes S (2024). A cellulose synthesis inhibitor affects cellulose synthase complex secretion and cortical microtubule dynamics. Plant Physiol, kiae232. PubMed | DOI

Dhahak A, Cézard L, Baumberger S, Peixinho J (2024). Kinetic, products and shrinkage for the pyrolysis of flax fibers. Journal of Analytical and Applied Pyrolysis, Vol 180, 106538. DOI

Nicolas-Francès V, Besson-Bard A, Meschini S, Klinguer A, Bonnotte A, Heloir MC, Citerne S, Inès D, Hichami S, Wendehenne D, Rosnoblet C (2024). CDC48 regulates immunity pathway in tobacco plants. Plant Physiol Biochem, 211:108714. PubMed | DOI

Amokrane L, Pokotylo I, Acket S, Ducloy A, Troncoso-Ponce MA, Cacas JL, Ruelland E (2024). Phospholipid Signaling in Crop Plants: A Field to Explore. Plants, 13(11):1532. PubMed | DOI

Jayabalan T, Pandard P, Binotto G, Gomes J, Ceschini X, Aube A, Gondelle F, Pion F, Baumberger S, Jongerius A, Gosselink RJA, Cozzoni E, Marlair G (2024). Safety profiling of technical lignins originating from various bioresources and conversion processes. Heliyon, 10(12):e32131. PubMed | DOI

Pachamuthu K, Simon M, Borges F (2024). Targeted suppression of siRNA biogenesis in Arabidopsis pollen promotes triploid seed viability. Nat Commun, 15(1):4612. PubMed | DOI

Nisler J, Klimeš P, Koncitíková R, Kadlecová A, Voller J, Chalaki M, Karampelias M, Murvanidze N, Werbrouck SPO, Kopecný D, Havlícek L, De Diego N, Briozzo P, Moréra S, Zalabák D, Spíchal L (2024). Cytokinin oxidase/dehydrogenase inhibitors: progress towards agricultural practice. J Exp Bot, erae239. PubMed | DOI

Kumar BKP, Beaubiat S, Yadav CB, Eshed R, Arazi T, Sherman A, Bouché N (2024). Genome wide inherited modifications of the tomato epigenome by trans-activated bacterial CG methyltransferase. Cell Mol Life Sci, 81(1):222. PubMed | DOI

Bhati KK, Luong AM, Dittrich-Domergue F, D'Andrea S, Moreau P, Batoko H (2024). Possible crosstalk between the Arabidopsis TSPO-related protein and the transcription factor WRINKLED1. Biochimie, S0300-9084(24)00105-6. PubMed | DOI

Chelysheva L, Morin H, Biot E, Nicolas A, Rech P, Da Costa M, Barel L, Laufs P, Palauqui JC (2024). M2WISH: An easy and efficient protocol for whole-mount mRNA in situ hybridization that allows 3D cell resolution of gene expression in Arabidopsis thaliana. Plant J, doi: 10.1111/tpj.16792. PubMed | DOI

Piedrahita-Rodríguez S, Alzate-Ramírez AF, Baumberger S, Cézard L, Ortiz-Sánchez M, Garcia DAE, Arenas AMZ, Moustakas K, Alzate CAC (2024). Strategy for the analysis of lignocellulosic biomass to select a viable transformation route in the Colombian context. Environ Sci Pollut Res Int, 2024 May 2. PubMed | DOI

Moret F, Jacquens L, Larignon P, Clément G, Coppin C, Noirot E, Courty PE, Fontaine Fl, Adrian M, Trouvelot S (2024). Physiological and developmental disturbances caused by Botryosphaeria dieback in the annual stems of grapevine. Front Plant Sci, 15:1394821. PubMed | DOI

Bouchez D, Uyttewaal M, Pastuglia M (2024). Spatiotemporal regulation of plant cell division. Curr Opin Plant Biol, 79:102530. PubMed | DOI

Calbry J, Goudounet G, Charlot F, Guyon-Debast A, Perroud PF, Nogué F (2024). The SpRY Cas9 variant release the PAM sequence constraint for genome editing in the model plant Physcomitrium patens. Transgenic Res, 33(1-2):67-74. PubMed | DOI

Hadjiefstathiou C, Manière A, Attia J, Pion F, Ducrot PH, Gore E, Grisel M (2024). Lignins interfacial behavior tailored by formulation parameters. Journal of Molecular Liquids, 399: 124415. DOI

Goelzer A, Rajjou L, Chardon F, Loudet O, Fromion V (2024). Resource allocation modeling for autonomous prediction of plant cell phenotypes. Metab Eng, 83:86-101. PubMed | DOI