Développement, Signalisation et Modélisation

Barthole G, To A, Marchive C, Brunaud V, Soubigou-Taconnat L, Berger N, Dubreucq B, Lepiniec L, Baud S (2014). MYB118 represses endosperm maturation in seeds of Arabidopsis. Plant Cell, 26:3519-3537. PubMed | DOI

David LC, Dechorgnat J, Berquin P, Routaboul JM, Debeaujon I, Daniel-Vedele F, Ferrario-Méry S (2014). Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7. J Exp Bot, 65:885-893. PubMed | DOI

Denay G, Creff A, Moussu S, Wagnon P, Thévenin J, Gerentes MF, Chambrier P, Dubreucq B, Ingram G (2014). Endosperm breakdown in Arabidopsis requires heterodimers of the basic helix-loop-helix proteins ZHOUPI and INDUCER OF CBP EXPRESSION 1. Development, 141:1222-1227. PubMed | DOI

Dubos C, Kelemen Z, Sebastian A, Bulow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R (2014). Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. BMC Genomics, 15:317. PubMed | DOI

Dugail I, Kalopissis A, Miquel M, Rainteau D, Zachowski A, Forest C (2014). Lipids in metabolic diseases. Biochimie, 96:1-2. PubMed | DOI

Magnani E, De Klein N, Nam HI, Kim JG, Pham K, Fiume E, Mudgett MB, Rhee SY (2014). A comprehensive analysis of microProteins reveals their potentially widespread mechanism of transcriptional regulation. Plant Physiol, 165:149-159. PubMed | DOI

Marchive C, Nikovics K, To A, Lepiniec L, Baud S (2014). Transcriptional regulation of fatty acid production in higher plants: Molecular bases and biotechnological outcomes. European Journal of Lipid Science and Technology, 116:1332-1343. PubMed | DOI

Masclaux-Daubresse C, Clément G, Anne P, Routaboul JM, Guiboileau A, Soulay F, Shirasu K, Yoshimoto K (2014). Stitching together the Multiple Dimensions of Autophagy Using Metabolomics and Transcriptomics Reveals Impacts on Metabolism, Development, and Plant Responses to the Environment in Arabidopsis. Plant Cell, 26:1857-1877. PubMed | DOI

Miquel M, Trigui G, D'Andrea S, Kelemen Z, Baud S, Berger A, Deruyffelaere C, Trubuil A, Lepiniec L, Dubreucq B (2014). Specialization of oleosins in oil body dynamics during seed development in Arabidopsis seeds. Plant Physiol, 164:1866-1878. PubMed | DOI

Simons M, Saha R, Amiour N, Kumar A, Guillard L, Clément G, Miquel M, Li Z, Mouille G, Lea PJ, Hirel B, Maranas CD (2014). Assessing the metabolic impact of nitrogen availability using a compartmentalized maize leaf genome-scale model. Plant Physiol, 166:1659-1674. PubMed | DOI

Xu W, Grain D, Bobet S, Le Gourrierec J, Thévenin J, Kelemen Z, Lepiniec L, Dubos C (2014). Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed. New Phytol, 202:132-144. PubMed | DOI

Xu W, Lepiniec L, Dubos C (2014). New insights toward the transcriptional engineering of proanthocyanidin biosynthesis. Plant Signal Behav, 9:e28736. PubMed | DOI

Boudaoud A, Burian A, Borowska-Wykret D, Uyttewaal M, Wrzalik R, Kwiatkowska D, Hamant O (2014). FibrilTool, an ImageJ plug-in to quantify fibrillar structures in raw microscopy images. Nat Protoc, 9:457-463. PubMed | DOI

Bouchabké-Coussa O, Obellianne M, Linderme D, Montes E, Maia-Grondard A, Vilaine F, Pannetier C (2013). Wuschel overexpression promotes somatic embryogenesis and induces organogenesis in cotton (Gossypium hirsutum L.) tissues cultured in vitro. Plant Cell Rep, 32:675-686. PubMed | DOI

Bouvier D'yvoire M, Bouchabké-Coussa O, Voorend W, Antelme S, Cézard L, Legée F, Le Bris P, Legay S, Whitehead C, Mcqueen-Mason SJ, Gomez LD, Jouanin L, Lapierre C, Sibout R (2013). Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon. Plant J, 73:496-508. PubMed | DOI

Chupeau MC, Granier F, Pichon O, Renou JP, Gaudin V, Chupeau Y (2013). Characterization of the early events leading to totipotency in an Arabidopsis protoplast liquid culture by temporal transcript profiling. Plant Cell, 25:2444-2463. PubMed | DOI

Fernandez A, Drozdzecki A, Hoogewijs K, Nguyen A, Beeckman T, Madder A, Hilson P (2013). Transcriptional and functional classification of the GOLVEN/ROOT GROWTH FACTOR/CLE-like signaling peptides reveals their role in lateral root and hair formation. Plant Physiol, 161:954-970. PubMed | DOI

Fernandez A, Hilson P, Beeckman T (2013). GOLVEN peptides as important regulatory signalling molecules of plant development. J Exp Bot, 64:5263-5268. PubMed | DOI

Jolivet P, Acevedo F, Boulard C, D'Andrea S, Faure JD, Kohli A, Nesi N, Valot B, Chardot T (2013). Crop seed oil bodies: from challenges in protein identification to an emerging picture of the oil body proteome. Proteomics, 13:1836-1849. PubMed | DOI

Nikolaev SV, Kolchanov NA, Golushko SK, Palauqui JC, Urban A, Amelina EV, Yurchenko AV, Golushko KS, Zubairova US, Penenko AV, Trubuil A (2013). Modeling of plant embryo morphodynamics at early developmental stages. Russian Journal of Genetics: Applied Research, 3:176-183. PubMed | DOI

Vilaine F, Kerchev P, Clément G, Batailler B, Cayla T, Bill L, Gissot L, Dinant S (2013). Increased expression of a phloem membrane protein encoded by NHL26 alters phloem export and sugar partitioning in Arabidopsis. Plant Cell, 25:1689-1708. PubMed | DOI

Arnaud N, Laufs P (2013). Plant development: brassinosteroids go out of bounds. Curr Biol, 23:R152-154. PubMed | DOI

Blein T, Pautot V, Laufs P (2013). Combinations of Mutations Sufficient to Alter Arabidopsis Leaf Dissection. Plants, 2:230-247. PubMed | DOI

Goncalves B, Nougue O, Jabbour F, Ridel C, Morin H, Laufs P, Manicacci D, Damerval C (2013). An APETALA3 homolog controls both petal identity and floral meristem patterning in Nigella damascena L. (Ranunculaceae). Plant J, 76:223-235. PubMed | DOI

Burguet J, Mailly P, Andrey P (2013). Statistical groupwise comparison of spatial point patterns in biological imaging. In 2013 International Symposium on Biomedical Imaging: From Nano to Macro, pp. 456-459, San Francisco, 7-11 April. DOI

Braybrook SA, Peaucelle A (2013). Mechano-chemical aspects of organ formation in Arabidopsis thaliana: the relationship between auxin and pectin. PLoS One, 8:e57813. PubMed | DOI

Dalmais M, Antelme S, Ho-Yue-Kuang S, Wang Y, Darracq O, D'yvoire MB, Cézard L, Legée F, Blondet E, Oria N, Troadec C, Brunaud V, Jouanin L, Höfte H, Bendahmane A, Lapierre C, Sibout R (2013). A TILLING Platform for Functional Genomics in Brachypodium distachyon. PLoS One, 8:e65503. PubMed | DOI

Gendre D, Mcfarlane HE, Johnson E, Mouille G, Sjodin A, Oh J, Levesque-Tremblay G, Watanabe Y, Samuels L, Bhalerao RP (2013). Trans-Golgi network localized ECHIDNA/Ypt interacting protein complex is required for the secretion of cell wall polysaccharides in Arabidopsis. Plant Cell, 25:2633-2646. PubMed | DOI

Geshi N, Johansen JN, Dilokpimol A, Rolland A, Belcram K, Verger S, Kotake T, Tsumuraya Y, Kaneko S, Tryfona T, Dupree P, Scheller HV, Höfte H, Mouille G (2013). A galactosyltransferase acting on arabinogalactan protein glycans is essential for embryo development in Arabidopsis. Plant J, 76:128-137. PubMed | DOI

Renault H, El Amrani A, Berger A, Mouille G, Soubigou-Taconnat L, Bouchereau A, Deleu C (2013). gamma-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. Plant Cell Environ, 36:1009-1018. PubMed | DOI

Robinson S, Burian A, Couturier E, Landrein B, Louveaux M, Neumann ED, Peaucelle A, Weber A, Nakayama N (2013). Mechanical control of morphogenesis at the shoot apex. J Exp Bot, 64:4729-4744. PubMed | DOI

Li-Beisson Y, Shorrosh B, Beisson F, Andersson MX, Arondel V, Bates PD, Baud S, Bird D, Debono A, Durrett TP, Franke RB, Graham IA, Katayama K, Kelly AA, Larson T, Markham JE, Miquel M, Molina I, Nishida I, Rowland O, Samuels L, Schmid KM, Wada H, Welti R, Xu C, Zallot R, Ohlrogge J (2013). Acyl-lipid metabolism. Arabidopsis Book, 11:e0161. PubMed | DOI

Schaart JG, Dubos C, Romero De La Fuente I, Van Houwelingen AM, De Vos RC, Jonker HH, Xu W, Routaboul JM, Lepiniec L, Bovy AG (2013). Identification and characterization of MYB-bHLH-WD40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry (Fragaria x ananassa) fruits. New Phytol, 197:454-467. PubMed | DOI

Xu W, Grain D, Le Gourrierec J, Harscoet E, Berger A, Jauvion V, Scagnelli A, Berger N, Bidzinski P, Kelemen Z, Salsac F, Baudry A, Routaboul JM, Lepiniec L, Dubos C (2013). Regulation of flavonoid biosynthesis involves an unexpected complex transcriptional regulation of TT8 expression, in Arabidopsis. New Phytol, 198:59-70. PubMed | DOI

Spinner L, Gadeyne A, Belcram K, Goussot M, Moison M, Duroc Y, Eeckhout D, De Winne N, Schaefer E, Van De Slijke E, Persiau G, Witters E, Gevaert K, De Jaeger G, Bouchez D, Van Damme D, Pastuglia M (2013). A protein phosphatase 2A complex spatially controls plant cell division. Nat Commun, 4:1863. PubMed | DOI

Tisne S, Serrand Y, Bach L, Gilbault E, Ben Ameur R, Balasse H, Voisin R, Bouchez D, Durand-Tardif M, Guerche P, Chareyron G, Da Rugna J, Camilleri C, Loudet O (2013). Phenoscope: an automated large-scale phenotyping platform offering high spatial homogeneity. Plant J, 74:534-544. PubMed | DOI

Houba-Herin N, Hennig L, Köhler C, Gaudin V (2012). A fruitful chromatin harvest: meeting summary of the Second European Workshop on Plant Chromatin 2011 in Versailles, France. Epigenetics, 7:307-311. PubMed | DOI

Bernard A, Domergue F, Pascal S, Jetter R, Renne C, Faure JD, Haslam RP, Napier JA, Lessire R, Joubes J (2012). Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. Plant Cell, 24:3106-3118. PubMed | DOI

Bou-Torrent J, Salla-Martret M, Brandt R, Musielak T, Palauqui JC, Martínez-García JF, Wenkel S (2012). ATHB4 and HAT3, two class II HD-ZIP transcription factors, control leaf development in Arabidopsis. Plant Signal Behav, 7:1382-1387. PubMed | DOI

Brandt R, Salla-Martret M, Bou-Torrent J, Musielak T, Stahl M, Lanz C, Ott F, Schmid M, Greb T, Schwarz M, Choi SB, Barton MK, Reinhart BJ, Liu T, Quint M, Palauqui JC, Martínez-García JF, Wenkel S (2012). Genome-wide binding-site analysis of REVOLUTA reveals a link between leaf patterning and light-mediated growth responses. Plant J, 72:31-42. PubMed | DOI

Truernit E, Bauby H, Belcram K, Barthelemy J, Palauqui JC (2012). OCTOPUS, a polarly localised membrane-associated protein, regulates phloem differentiation entry in Arabidopsis thaliana. Development, 139:1306-1315. PubMed | DOI

Xue W, Ruprecht C, Street N, Hématy K, Chang C, Frommer WB, Persson S, Niittyla T (2012). Paramutation-like interaction of T-DNA loci in Arabidopsis. PLoS One, 7:e51651. PubMed | DOI

Cortizo M, Laufs P (2012). Genetic basis of the "sleeping leaves" revealed. Proc Natl Acad Sci U S A, 109:11474-11475. PubMed | DOI

Ernoult-Lange M, Baconnais S, Harper M, Minshall N, Souquere S, Boudier T, Benard M, Andrey P, Pierron G, Kress M, Standart N, Le Cam E, Weil D (2012). Multiple binding of repressed mRNAs by the P-body protein Rck/p54. RNA, 18:1702-1715. PubMed | DOI

Braybrook SA, Höfte H, Peaucelle A (2012). Probing the mechanical contributions of the pectin matrix: insights for cell growth. Plant Signal Behav, 7:1037-1041. PubMed | DOI

Carroll A, Mansoori N, Li S, Lei L, Vernhettes S, Visser RG, Somerville C, Gu Y, Trindade LM (2012). Complexes with mixed primary and secondary cellulose synthases are functional in Arabidopsis plants. Plant Physiol, 160:726-737. PubMed | DOI

Eudes A, George A, Mukerjee P, Kim JS, Pollet B, Benke PI, Yang F, Mitra P, Sun L, Cetinkol OP, Chabout S, Mouille G, Soubigou-Taconnat L, Balzergue S, Singh S, Holmes BM, Mukhopadhyay A, Keasling JD, Simmons BA, Lapierre C, Ralph J, Loque D (2012). Biosynthesis and incorporation of side-chain-truncated lignin monomers to reduce lignin polymerization and enhance saccharification. Plant Biotechnol J, 10:609-620. PubMed | DOI

Gierlinger N, Keplinger T, Harrington M (2012). Imaging of plant cell walls by confocal Raman microscopy. Nat Protoc, 7:1694-1708. PubMed | DOI

Gonneau M, Höfte H, Vernhettes S (2012). Fluorescent tags to explore cell wall structure and dynamics. Front Plant Sci, 3:145. PubMed | DOI

Markakis MN, De Cnodder T, Lewandowski M, Simon D, Boron A, Balcerowicz D, Doubbo T, Taconnat L, Renou JP, Höfte H, Verbelen JP, Vissenberg K (2012). Identification of genes involved in the ACC-mediated control of root cell elongation in Arabidopsis thaliana. BMC Plant Biol, 12:208. PubMed | DOI