Développement, Signalisation et Modélisation

Morineau C, Gissot L, Bellec Y, Hématy K, Tellier F, Renne C, Haslam R, Beaudoin F, Napier J, Faure JD (2016). Dual Fatty Acid Elongase Complex Interactions in Arabidopsis. PLoS One, 11:e0160631. PubMed | DOI

Biot E, Cortizo M, Burguet J, Kiss A, Oughou M, Maugarny-Calès A, Goncalves B, Adroher B, Andrey P, Boudaoud A, Laufs P (2016). Multiscale quantification of morphodynamics: MorphoLeaf software for 2D shape analysis. Development, 143:3417-3428. PubMed | DOI

Maugarny-Calès A, Goncalves B, Jouannic S, Melkonian M, Ka-Shu Wong G, Laufs P (2016). Apparition of the NAC Transcription Factors Predates the Emergence of Land Plants. Mol Plant, 9:1345-1348. PubMed | DOI

Michalko J, Glanc M, Perrot-Rechenmann C, Friml J (2016). Strong morphological defects in conditional Arabidopsis abp1 knock-down mutants generated in absence of functional ABP1 protein. F1000Res, 5:86. PubMed | DOI

Bastien R, Legland D, Martin M, Fregosi L, Peaucelle A, Douady S, Moulia B, Höfte H (2016). KymoRod: a method for automated kinematic analysis of rod-shaped plant organs. Plant J, 88:468-475. PubMed | DOI

Biot E, Crowell E, Burguet J, Höfte H, Vernhettes S, Andrey P (2016). Strategy and software for the statistical spatial analysis of 3D intracellular distributions. Plant J, 87:230-242. PubMed | DOI

Legland D, Arganda-Carreras I, Andrey P (2016). MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ. Bioinformatics, 32:3532-3534. PubMed | DOI

Peaucelle A, Couder Y (2016). Fibonacci spirals in a brown alga [Sargassum muticum (Yendo) Fensholt] and in a land plant [Arabidopsis thaliana (L.) Heynh.]: a case of morphogenetic convergence. Acta Societatis Botanicorum Poloniae, 85:. PubMed | DOI

Von Schwartzenberg K, Lindner AC, Gruhn N, Simura J, Novák O, Strnad M, Gonneau M, Nogué F, Heyl A (2016). CHASE domain-containing receptors play an essential role in the cytokinin response of the moss Physcomitrella patens. J Exp Bot, 67:667-679. PubMed | DOI

Voxeur A, Höfte H (2016). Cell wall integrity signaling in plants: "To grow or not to grow that's the question". Glycobiology, 26:950-960. PubMed | DOI

Yang W, Schuster C, Beahan CT, Charoensawan V, Peaucelle A, Bacic A, Doblin MS, Wightman R, Meyerowitz EM (2016). Regulation of Meristem Morphogenesis by Cell Wall Synthases in Arabidopsis. Curr Biol, 26:1404-1415. PubMed | DOI

Baud S, Kelemen Z, Thévenin J, Boulard C, Blanchet S, To A, Payre M, Berger N, Effroy-Cuzzi D, Franco-Zorrilla JM, Godoy M, Solano R, Thevenon E, Parcy F, Lepiniec L, Dubreucq B (2016). Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed. Plant Physiol, 171:1099-1112. PubMed | DOI

Fatihi A, Boulard C, Bouyer D, Baud S, Dubreucq B, Lepiniec L (2016). Deciphering and modifying LAFL transcriptional regulatory network in seed for improving yield and quality of storage compounds. Plant Sci, 250:198-204. PubMed | DOI

Fiume E, De Klein N, Rhee SY, Magnani E (2016). A Framework for Discovering, Designing, and Testing MicroProteins to Regulate Synthetic Transcriptional Modules. Methods Mol Biol, 1482:175-188. PubMed | DOI

Fiume E, Guyon V, Remoue C, Magnani E, Miquel M, Grain D, Lepiniec L (2016). TWS1, a Novel Small Protein, Regulates Various Aspects of Seed and Plant Development. Plant Physiol, 172:1732-1745. PubMed | DOI

Kelemen Z, Przybyla-Toscano J, Tissot N, Lepiniec L, Dubos C (2016). Fast and Efficient Cloning of Cis-Regulatory Sequences for High-Throughput Yeast One-Hybrid Analyses of Transcription Factors. Methods Mol Biol, 1482:139-149. PubMed | DOI

Strenkert D, Limso CA, Fatihi A, Schmollinger S, Basset GJ, Merchant SS (2016). Genetically Programmed Changes in Photosynthetic Cofactor Metabolism in Copper-deficient Chlamydomonas. J Biol Chem, 291:19118-19131. PubMed | DOI

Thévenin J, Xu W, Vaisman L, Lepiniec L, Dubreucq B, Dubos C (2016). The Physcomitrella patens System for Transient Gene Expression Assays. Methods Mol Biol, 1482:151-161. PubMed | DOI

Troncoso-Ponce MA, Barthole G, Tremblais G, To A, Miquel M, Lepiniec L, Baud S (2016). Transcriptional Activation of Two Delta-9 Palmitoyl-ACP Desaturase Genes by MYB115 and MYB118 Is Critical for Biosynthesis of Omega-7 Monounsaturated Fatty Acids in the Endosperm of Arabidopsis Seeds. Plant Cell, 28:2666-2682. PubMed | DOI

Troncoso-Ponce MA, Nikovics K, Marchive C, Lepiniec L, Baud S (2016). New insights on the organization and regulation of the fatty acid biosynthetic network in the model higher plant Arabidopsis thaliana. Biochimie, 120:3-8. PubMed | DOI

Xu W, Fiume E, Coen O, Péchoux C, Lepiniec L, Magnani E (2016). Endosperm and Nucellus Develop Antagonistically in Arabidopsis Seeds. Plant Cell, 28:1343-1360. PubMed | DOI

Adler S, Mouille G, Fock-Bastide I, Citerne S, Noirot M (2015). Comparison between Coffea arabica L. ‘Laurina’ and C. arabica ‘Bourbon’ seedlings grown in daylight or darkness for their polysaccharidic cell wall composition and caffeine and chlorogenic acid contents. Trees, 30:665-674. PubMed | DOI

Draeger C, Ndinyanka Fabrice T, Gineau E, Mouille G, Kuhn BM, Moller I, Abdou MT, Frey B, Pauly M, Bacic A, Ringli C (2015). Arabidopsis leucine-rich repeat extensin (LRX) proteins modify cell wall composition and influence plant growth. BMC Plant Biol, 15:155. PubMed | DOI

Le Hir R, Spinner L, Klemens PA, Chakraborti D, De Marco F, Vilaine F, Wolff N, Lemoine R, Porcheron B, Géry C, Téoulé E, Chabout S, Mouille G, Neuhaus HE, Dinant S, Bellini C (2015). Disruption of the Sugar Transporters AtSWEET11 and AtSWEET12 Affects Vascular Development and Freezing Tolerance in Arabidopsis. Mol Plant, 8:1687-1690. PubMed | DOI

Fernandez A, Drozdzecki A, Hoogewijs K, Vassileva V, Madder A, Beeckman T, Hilson P (2015). The GLV6/RGF8/CLEL2 peptide regulates early pericycle divisions during lateral root initiation. J Exp Bot, 66:5245-5256. PubMed | DOI

Ghorbani S, Lin YC, Parizot B, Fernandez A, Njo MF, Van De Peer Y, Beeckman T, Hilson P (2015). Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays. J Exp Bot, 66:5257-5269. PubMed | DOI

Szakonyi D, Van Landeghem S, Baerenfaller K, Baeyens L, Blomme J, Casanova-Saez R, De Bodt S, Esteve-Bruna D, Fiorani F, Gonzalez N, Grønlund J, Immink R, Jover-Gil S, Kuwabara A, Muñoz-Nortes T, Van Dijk ADJ, Wilson-Sánchez D, Buchanan-Wollaston V, Angenent G, Van De Peer Y, Inzé D, Micol JL, Gruissem W, Walsh S, Hilson P (2015). The KnownLeaf literature curation system captures knowledge about Arabidopsis leaf growth and development and facilitates integrated data mining. Current Plant Biology, 2:1-11. PubMed | DOI

Wang Y, Bouchabké-Coussa O, Le Bris P, Antelme S, Soulhat C, Gineau E, Dalmais M, Bendahmane A, Morin H, Mouille G, Legée F, Cézard L, Lapierre C, Sibout R (2015). LACCASE5 is required for lignification of the Brachypodium distachyon Culm. Plant Physiol, 168:192-204. PubMed | DOI

Del Prete S, Mikulski P, Schubert D, Gaudin V (2015). One, Two, Three: Polycomb Proteins Hit All Dimensions of Gene Regulation. Genes, 6:520-542. PubMed | DOI

Hecker A, Brand LH, Peter S, Simoncello N, Kilian J, Harter K, Gaudin V, Wanke D (2015). The Arabidopsis GAGA-Binding Factor BASIC PENTACYSTEINE6 Recruits the POLYCOMB-REPRESSIVE COMPLEX1 Component LIKE HETEROCHROMATIN PROTEIN1 to GAGA DNA Motifs. Plant Physiol, 168:1013-1024. PubMed | DOI

Mozgova I, Köhler C, Gaudin V, Hennig L (2015). The many faces of plant chromatin: Meeting summary of the 4th European workshop on plant chromatin 2015, Uppsala, Sweden. Epigenetics, 10:1084-1090. PubMed | DOI

Anne P, Azzopardi M, Gissot L, Beaubiat S, Hématy K, Palauqui JC (2015). OCTOPUS Negatively Regulates BIN2 to Control Phloem Differentiation in Arabidopsis thaliana. Curr Biol, 25:2584-2590. PubMed | DOI

Goncalves B, Hasson A, Belcram K, Cortizo M, Morin H, Nikovics K, Vialette-Guiraud A, Takeda S, Aida M, Laufs P, Arnaud N (2015). A conserved role for CUP-SHAPED COTYLEDON genes during ovule development. Plant J, 83:732-742. PubMed | DOI

Hepworth SR, Pautot V (2015). Beyond the Divide: Boundaries for Patterning and Stem Cell Regulation in Plants. Front Plant Sci, 6:1052. PubMed | DOI

Khan M, Ragni L, Tabb P, Salasini BC, Chatfield S, Datla R, Lock J, Kuai X, Despres C, Proveniers M, Yongguo C, Xiang D, Morin H, Rulliere JP, Citerne S, Hepworth SR, Pautot V (2015). Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. Plant Physiol, 169:2166-2186. PubMed | DOI

Landrein B, Kiss A, Sassi M, Chauvet A, Das P, Cortizo M, Laufs P, Takeda S, Aida M, Traas J, Vernoux T, Boudaoud A, Hamant O (2015). Mechanical stress contributes to the expression of the STM homeobox gene in Arabidopsis shoot meristems. Elife, 4:e07811. PubMed | DOI

Rast-Somssich MI, Broholm S, Jenkins H, Canales C, Vlad D, Kwantes M, Bilsborough G, Dello Ioio R, Ewing RM, Laufs P, Huijser P, Ohno C, Heisler MG, Hay A, Tsiantis M (2015). Alternate wiring of a KNOXI genetic network underlies differences in leaf development of A. thaliana and C. hirsuta. Genes Dev, 29:2391-2404. PubMed | DOI

Poulet A, Arganda-Carreras I, Legland D, Probst AV, Andrey P, Tatout C (2015). NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei. Bioinformatics, 31:1144-1146. PubMed | DOI

Silva JVC, Legland D, Cauty C, Kolotuev I, Floury J (2015). Characterization of the microstructure of dairy systems using automated image analysis. Food Hydrocolloids, 44:360-371. PubMed | DOI

Bastien R, Douady S, Moulia B (2015). A unified model of shoot tropism in plants: photo-, gravi- and Propio-ception. PLoS Comput Biol, 11:e1004037. PubMed | DOI

Esque J, Urbain A, Etchebest C, De Brevern AG (2015). Sequence-structure relationship study in all-alpha transmembrane proteins using an unsupervised learning approach. Amino Acids, 47:2303-2322. PubMed | DOI

Fujimoto M, Suda Y, Vernhettes S, Nakano A, Ueda T (2015). Phosphatidylinositol 3-kinase and 4-kinase have distinct roles in intracellular trafficking of cellulose synthase complexes in Arabidopsis thaliana. Plant Cell Physiol, 56:287-298. PubMed | DOI

Höfte H (2015). The yin and yang of cell wall integrity control: brassinosteroid and FERONIA signaling. Plant Cell Physiol, 56:224-231. PubMed | DOI

Luo Y, Scholl S, Doering A, Zhang Y, Irani NG, Rubbo SD, Neumetzler L, Krishnamoorthy P, Van Houtte I, Mylle E, Bischoff V, Vernhettes S, Winne J, Friml J, Stierhof YD, Schumacher K, Persson S, Russinova E (2015). V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis. Nat Plants, 1:15094. PubMed | DOI

Peaucelle A, Wightman R, Höfte H (2015). The Control of Growth Symmetry Breaking in the Arabidopsis Hypocotyl. Curr Biol, 25:1746-1752. PubMed | DOI

Worden N, Wilkop TE, Esteve VE, Jeannotte R, Lathe R, Vernhettes S, Weimer B, Hicks G, Alonso J, Labavitch J, Persson S, Ehrhardt D, Drakakaki G (2015). CESA TRAFFICKING INHIBITOR inhibits cellulose deposition and interferes with the trafficking of cellulose synthase complexes and their associated proteins KORRIGAN1 and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN1. Plant Physiol, 167:381-393. PubMed | DOI

Boulard C, Bardet M, Chardot T, Dubreucq B, Gromova M, Guillermo A, Miquel M, Nesi N, Yen-Nicolay S, Jolivet P (2015). The structural organization of seed oil bodies could explain the contrasted oil extractability observed in two rapeseed genotypes. Planta, 242:53-68. PubMed | DOI

De Klein N, Magnani E, Banf M, Rhee SY (2015). microProtein Prediction Program (miP3): A Software for Predicting microProteins and Their Target Transcription Factors. Int J Genomics, 2015:734147. PubMed | DOI

Deruyffelaere C, Bouchez I, Morin H, Guillot A, Miquel M, Froissard M, Chardot T, D'Andrea S (2015). Ubiquitin-Mediated Proteasomal Degradation of Oleosins is Involved in Oil Body Mobilization During Post-Germinative Seedling Growth in Arabidopsis. Plant Cell Physiol, 56:1374-1387. PubMed | DOI

Farace G, Visconti S, Marchive C, Aducci P, Marra M, Trossat-Magnin C (2015). Characterization, functional validation and gene expression patterns of two 14-3-3 isoforms from Vitis vinifera. Vitis, 54:33-40. PubMed | DOI