Développement, Signalisation et Modélisation

Peaucelle A, Couder Y (2016). Fibonacci spirals in a brown alga [Sargassum muticum (Yendo) Fensholt] and in a land plant [Arabidopsis thaliana (L.) Heynh.]: a case of morphogenetic convergence. Acta Societatis Botanicorum Poloniae, 85:. PubMed | DOI

Von Schwartzenberg K, Lindner AC, Gruhn N, Simura J, Novák O, Strnad M, Gonneau M, Nogué F, Heyl A (2016). CHASE domain-containing receptors play an essential role in the cytokinin response of the moss Physcomitrella patens. J Exp Bot, 67:667-679. PubMed | DOI

Voxeur A, Höfte H (2016). Cell wall integrity signaling in plants: "To grow or not to grow that's the question". Glycobiology, 26:950-960. PubMed | DOI

Yang W, Schuster C, Beahan CT, Charoensawan V, Peaucelle A, Bacic A, Doblin MS, Wightman R, Meyerowitz EM (2016). Regulation of Meristem Morphogenesis by Cell Wall Synthases in Arabidopsis. Curr Biol, 26:1404-1415. PubMed | DOI

Belcram K, Palauqui JC, Pastuglia M (2016). Studying Cell Division Plane Positioning in Early-Stage Embryos 2016. Methods Mol Biol, 1370:183-195. PubMed | DOI

Adler S, Mouille G, Fock-Bastide I, Citerne S, Noirot M (2015). Comparison between Coffea arabica L. ‘Laurina’ and C. arabica ‘Bourbon’ seedlings grown in daylight or darkness for their polysaccharidic cell wall composition and caffeine and chlorogenic acid contents. Trees, 30:665-674. PubMed | DOI

Draeger C, Ndinyanka Fabrice T, Gineau E, Mouille G, Kuhn BM, Moller I, Abdou MT, Frey B, Pauly M, Bacic A, Ringli C (2015). Arabidopsis leucine-rich repeat extensin (LRX) proteins modify cell wall composition and influence plant growth. BMC Plant Biol, 15:155. PubMed | DOI

Le Hir R, Spinner L, Klemens PA, Chakraborti D, De Marco F, Vilaine F, Wolff N, Lemoine R, Porcheron B, Géry C, Téoulé E, Chabout S, Mouille G, Neuhaus HE, Dinant S, Bellini C (2015). Disruption of the Sugar Transporters AtSWEET11 and AtSWEET12 Affects Vascular Development and Freezing Tolerance in Arabidopsis. Mol Plant, 8:1687-1690. PubMed | DOI

De Cuyper C, Fromentin J, Yocgo RE, De Keyser A, Guillotin B, Kunert K, Boyer FD, Goormachtig S (2015). From lateral root density to nodule number, the strigolactone analogue GR24 shapes the root architecture of Medicago truncatula. J Exp Bot, 66:137-146. PubMed | DOI

Lopez-Obando M, Ligerot Y, Bonhomme S, Boyer FD, Rameau C (2015). Strigolactone biosynthesis and signaling in plant development. Development, 142:3615-3619. PubMed | DOI

Parent JS, Jauvion V, Bouché N, Beclin C, Hachet M, Zytnicki M, Vaucheret H (2015). Post-transcriptional gene silencing triggered by sense transgenes involves uncapped antisense RNA and differs from silencing intentionally triggered by antisense transgenes. Nucleic Acids Res, 43:8464-8475. PubMed | DOI

Fernandez A, Drozdzecki A, Hoogewijs K, Vassileva V, Madder A, Beeckman T, Hilson P (2015). The GLV6/RGF8/CLEL2 peptide regulates early pericycle divisions during lateral root initiation. J Exp Bot, 66:5245-5256. PubMed | DOI

Ghorbani S, Lin YC, Parizot B, Fernandez A, Njo MF, Van De Peer Y, Beeckman T, Hilson P (2015). Expanding the repertoire of secretory peptides controlling root development with comparative genome analysis and functional assays. J Exp Bot, 66:5257-5269. PubMed | DOI

Szakonyi D, Van Landeghem S, Baerenfaller K, Baeyens L, Blomme J, Casanova-Saez R, De Bodt S, Esteve-Bruna D, Fiorani F, Gonzalez N, Grønlund J, Immink R, Jover-Gil S, Kuwabara A, Muñoz-Nortes T, Van Dijk ADJ, Wilson-Sánchez D, Buchanan-Wollaston V, Angenent G, Van De Peer Y, Inzé D, Micol JL, Gruissem W, Walsh S, Hilson P (2015). The KnownLeaf literature curation system captures knowledge about Arabidopsis leaf growth and development and facilitates integrated data mining. Current Plant Biology, 2:1-11. PubMed | DOI

Wang Y, Bouchabké-Coussa O, Le Bris P, Antelme S, Soulhat C, Gineau E, Dalmais M, Bendahmane A, Morin H, Mouille G, Legée F, Cézard L, Lapierre C, Sibout R (2015). LACCASE5 is required for lignification of the Brachypodium distachyon Culm. Plant Physiol, 168:192-204. PubMed | DOI

Del Prete S, Mikulski P, Schubert D, Gaudin V (2015). One, Two, Three: Polycomb Proteins Hit All Dimensions of Gene Regulation. Genes, 6:520-542. PubMed | DOI

Hecker A, Brand LH, Peter S, Simoncello N, Kilian J, Harter K, Gaudin V, Wanke D (2015). The Arabidopsis GAGA-Binding Factor BASIC PENTACYSTEINE6 Recruits the POLYCOMB-REPRESSIVE COMPLEX1 Component LIKE HETEROCHROMATIN PROTEIN1 to GAGA DNA Motifs. Plant Physiol, 168:1013-1024. PubMed | DOI

Mozgova I, Köhler C, Gaudin V, Hennig L (2015). The many faces of plant chromatin: Meeting summary of the 4th European workshop on plant chromatin 2015, Uppsala, Sweden. Epigenetics, 10:1084-1090. PubMed | DOI

Goncalves B, Hasson A, Belcram K, Cortizo M, Morin H, Nikovics K, Vialette-Guiraud A, Takeda S, Aida M, Laufs P, Arnaud N (2015). A conserved role for CUP-SHAPED COTYLEDON genes during ovule development. Plant J, 83:732-742. PubMed | DOI

Hepworth SR, Pautot V (2015). Beyond the Divide: Boundaries for Patterning and Stem Cell Regulation in Plants. Front Plant Sci, 6:1052. PubMed | DOI

Khan M, Ragni L, Tabb P, Salasini BC, Chatfield S, Datla R, Lock J, Kuai X, Despres C, Proveniers M, Yongguo C, Xiang D, Morin H, Rulliere JP, Citerne S, Hepworth SR, Pautot V (2015). Repression of Lateral Organ Boundary Genes by PENNYWISE and POUND-FOOLISH Is Essential for Meristem Maintenance and Flowering in Arabidopsis. Plant Physiol, 169:2166-2186. PubMed | DOI

Landrein B, Kiss A, Sassi M, Chauvet A, Das P, Cortizo M, Laufs P, Takeda S, Aida M, Traas J, Vernoux T, Boudaoud A, Hamant O (2015). Mechanical stress contributes to the expression of the STM homeobox gene in Arabidopsis shoot meristems. Elife, 4:e07811. PubMed | DOI

Rast-Somssich MI, Broholm S, Jenkins H, Canales C, Vlad D, Kwantes M, Bilsborough G, Dello Ioio R, Ewing RM, Laufs P, Huijser P, Ohno C, Heisler MG, Hay A, Tsiantis M (2015). Alternate wiring of a KNOXI genetic network underlies differences in leaf development of A. thaliana and C. hirsuta. Genes Dev, 29:2391-2404. PubMed | DOI

Poulet A, Arganda-Carreras I, Legland D, Probst AV, Andrey P, Tatout C (2015). NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei. Bioinformatics, 31:1144-1146. PubMed | DOI

Silva JVC, Legland D, Cauty C, Kolotuev I, Floury J (2015). Characterization of the microstructure of dairy systems using automated image analysis. Food Hydrocolloids, 44:360-371. PubMed | DOI

Bastien R, Douady S, Moulia B (2015). A unified model of shoot tropism in plants: photo-, gravi- and Propio-ception. PLoS Comput Biol, 11:e1004037. PubMed | DOI

Esque J, Urbain A, Etchebest C, De Brevern AG (2015). Sequence-structure relationship study in all-alpha transmembrane proteins using an unsupervised learning approach. Amino Acids, 47:2303-2322. PubMed | DOI

Fujimoto M, Suda Y, Vernhettes S, Nakano A, Ueda T (2015). Phosphatidylinositol 3-kinase and 4-kinase have distinct roles in intracellular trafficking of cellulose synthase complexes in Arabidopsis thaliana. Plant Cell Physiol, 56:287-298. PubMed | DOI

Höfte H (2015). The yin and yang of cell wall integrity control: brassinosteroid and FERONIA signaling. Plant Cell Physiol, 56:224-231. PubMed | DOI

Luo Y, Scholl S, Doering A, Zhang Y, Irani NG, Rubbo SD, Neumetzler L, Krishnamoorthy P, Van Houtte I, Mylle E, Bischoff V, Vernhettes S, Winne J, Friml J, Stierhof YD, Schumacher K, Persson S, Russinova E (2015). V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis. Nat Plants, 1:15094. PubMed | DOI

Peaucelle A, Wightman R, Höfte H (2015). The Control of Growth Symmetry Breaking in the Arabidopsis Hypocotyl. Curr Biol, 25:1746-1752. PubMed | DOI

Worden N, Wilkop TE, Esteve VE, Jeannotte R, Lathe R, Vernhettes S, Weimer B, Hicks G, Alonso J, Labavitch J, Persson S, Ehrhardt D, Drakakaki G (2015). CESA TRAFFICKING INHIBITOR inhibits cellulose deposition and interferes with the trafficking of cellulose synthase complexes and their associated proteins KORRIGAN1 and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN1. Plant Physiol, 167:381-393. PubMed | DOI

Boyer FD, De Saint Germain A, Pouvreau JB, Clavé G, Pillot JP, Roux A, Rasmussen A, Depuydt S, Lauressergues D, Frei Dit Frey N, Heugebaert TS, Stevens CV, Geelen D, Goormachtig S, Rameau C (2014). New strigolactone analogs as plant hormones with low activities in the rhizosphere. Mol Plant, 7:675-690. PubMed | DOI

Hoffmann B, Proust H, Belcram K, Labrune C, Boyer FD, Rameau C, Bonhomme S (2014). Strigolactones inhibit caulonema elongation and cell division in the moss Physcomitrella patens. PLoS One, 9:e99206. PubMed | DOI

Ikram S, Durandet M, Vesa S, Pereira S, Guerche P, Bonhomme S (2014). Functional redundancy and/or ongoing pseudogenization among F-box protein genes expressed in Arabidopsis male gametophyte. Plant Reprod, 27:95-107. PubMed | DOI

Rameau C, Bertheloot J, Leduc N, Andrieu B, Foucher F, Sakr S (2014). Multiple pathways regulate shoot branching. Front Plant Sci, 5:741. PubMed | DOI

Xolin A, Stévenin A, Pucheault M, Norsikian S, Boyer FD, Beau JM (2014). Glycosylation with N-acetyl glycosamine donors using catalytic iron(iii) triflate: from microwave batch chemistry to a scalable continuous-flow process. Org. Chem. Front., 1:992-1000. PubMed | DOI

Brousse C, Liu Q, Beauclair L, Deremetz A, Axtell MJ, Bouché N (2014). A non-canonical plant microRNA target site. Nucleic Acids Res, 42:5270-5279. PubMed | DOI

Coustham V, Vlad D, Deremetz A, Gy I, Cubillos FA, Kerdaffrec E, Loudet O, Bouché N (2014). SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1. PLoS One, 9:e84687. PubMed | DOI

Mathieu O, Bouché N (2014). Interplay between chromatin and RNA processing. Curr Opin Plant Biol, 18:60-65. PubMed | DOI

Del Prete S, Arpòn J, Sakai K, Andrey P, Gaudin V (2014). Nuclear architecture and chromatin dynamics in interphase nuclei of Arabidopsis thaliana. Cytogenet Genome Res, 143:28-50. PubMed | DOI

Jarillo JA, Gaudin V, Hennig L, Köhler C, Pineiro M (2014). Plant chromatin warms up in Madrid: meeting summary of the 3rd European Workshop on Plant Chromatin 2013, Madrid, Spain. Epigenetics, 9:644-652. PubMed | DOI

Le Roux C, Del Prete S, Boutet S, Perreau F, Balague C, Roby D, Fagard M, Gaudin V (2014). The hnRNP-Q protein LIF2 participates in the plant immune response. PLoS One, 9:e99343. PubMed | DOI

Arnaud N, Pautot V (2014). Ring the BELL and tie the KNOX: roles for TALEs in gynoecium development. Front Plant Sci, 5:93. PubMed | DOI

Burguet J, Andrey P (2014). Statistical comparison of spatial point patterns in biological imaging. PLoS One, 9:e87759. PubMed | DOI

Gul-Mohammed J, Arganda-Carreras I, Andrey P, Galy V, Boudier T (2014). A generic classification-based method for segmentation of nuclei in 3D images of early embryos. BMC Bioinformatics, 15:9. PubMed | DOI

Legland D, Devaux MF, Guillon F (2014). Statistical mapping of maize bundle intensity at the stem scale using spatial normalisation of replicated images. PLoS One, 9:e90673. PubMed | DOI

Miart F, Desprez T, Biot E, Morin H, Belcram K, Höfte H, Gonneau M, Vernhettes S (2014). Spatio-temporal analysis of cellulose synthesis during cell plate formation in Arabidopsis. Plant J, 77:71-84. PubMed | DOI

Vain T, Crowell EF, Timpano H, Biot E, Desprez T, Mansoori N, Trindade LM, Pagant S, Robert S, Höfte H, Gonneau M, Vernhettes S (2014). The Cellulase KORRIGAN Is Part of the Cellulose Synthase Complex. Plant Physiol, 165:1521-1532. PubMed | DOI

Bastien R, Douady S, Moulia B (2014). A unifying modeling of plant shoot gravitropism with an explicit account of the effects of growth. Front Plant Sci, 5:136. PubMed | DOI