Kelemen Z, Przybyla-Toscano J, Tissot N, Lepiniec L, Dubos C (2016). Fast and Efficient Cloning of Cis-Regulatory Sequences for High-Throughput Yeast One-Hybrid Analyses of Transcription Factors. Methods Mol Biol, 1482:139-149. PubMed | DOI

Strenkert D, Limso CA, Fatihi A, Schmollinger S, Basset GJ, Merchant SS (2016). Genetically Programmed Changes in Photosynthetic Cofactor Metabolism in Copper-deficient Chlamydomonas. J Biol Chem, 291:19118-19131. PubMed | DOI

Thévenin J, Xu W, Vaisman L, Lepiniec L, Dubreucq B, Dubos C (2016). The Physcomitrella patens System for Transient Gene Expression Assays. Methods Mol Biol, 1482:151-161. PubMed | DOI

Troncoso-Ponce MA, Barthole G, Tremblais G, To A, Miquel M, Lepiniec L, Baud S (2016). Transcriptional Activation of Two Delta-9 Palmitoyl-ACP Desaturase Genes by MYB115 and MYB118 Is Critical for Biosynthesis of Omega-7 Monounsaturated Fatty Acids in the Endosperm of Arabidopsis Seeds. Plant Cell, 28:2666-2682. PubMed | DOI

Troncoso-Ponce MA, Nikovics K, Marchive C, Lepiniec L, Baud S (2016). New insights on the organization and regulation of the fatty acid biosynthetic network in the model higher plant Arabidopsis thaliana. Biochimie, 120:3-8. PubMed | DOI

Xu W, Fiume E, Coen O, Péchoux C, Lepiniec L, Magnani E (2016). Endosperm and Nucellus Develop Antagonistically in Arabidopsis Seeds. Plant Cell, 28:1343-1360. PubMed | DOI

Boulard C, Bardet M, Chardot T, Dubreucq B, Gromova M, Guillermo A, Miquel M, Nesi N, Yen-Nicolay S, Jolivet P (2015). The structural organization of seed oil bodies could explain the contrasted oil extractability observed in two rapeseed genotypes. Planta, 242:53-68. PubMed | DOI

De Klein N, Magnani E, Banf M, Rhee SY (2015). microProtein Prediction Program (miP3): A Software for Predicting microProteins and Their Target Transcription Factors. Int J Genomics, 2015:734147. PubMed | DOI

Deruyffelaere C, Bouchez I, Morin H, Guillot A, Miquel M, Froissard M, Chardot T, D'Andrea S (2015). Ubiquitin-Mediated Proteasomal Degradation of Oleosins is Involved in Oil Body Mobilization During Post-Germinative Seedling Growth in Arabidopsis. Plant Cell Physiol, 56:1374-1387. PubMed | DOI

Farace G, Visconti S, Marchive C, Aducci P, Marra M, Trossat-Magnin C (2015). Characterization, functional validation and gene expression patterns of two 14-3-3 isoforms from Vitis vinifera. Vitis, 54:33-40. PubMed | DOI

Grimault A, Gendrot G, Chaignon S, Gilard F, Tcherkez G, Thévenin J, Dubreucq B, Depege-Fargeix N, Rogowsky PM (2015). Role of B3 domain transcription factors of the AFL family in maize kernel filling. Plant Sci, 236:116-125. PubMed | DOI

Grimault A, Gendrot G, Chamot S, Widiez T, Rabille H, Gerentes MF, Creff A, Thévenin J, Dubreucq B, Ingram GC, Rogowsky PM, Depege-Fargeix N (2015). ZmZHOUPI, an endosperm-specific basic helix-loop-helix transcription factor involved in maize seed development. Plant J, 84:574-586. PubMed | DOI

Kelemen Z, Sebastian A, Xu W, Grain D, Salsac F, Avon A, Berger N, Tran J, Dubreucq B, Lurin C, Lepiniec L, Contreras-Moreira B, Dubos C (2015). Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One, 10:e0141044. PubMed | DOI

Miquel M, Trigui G, Trubuil A, Dubreucq B (2015). Imaging and quantitative analysis of size and distribution of sperical bodies, e.g. embryonic oil bodies. Bio-Protocole, 5:1-6. PubMed | DOI

Shen Y, Devic M, Lepiniec L, Zhou DX (2015). Chromodomain, Helicase and DNA-binding CHD1 protein, CHR5, are involved in establishing active chromatin state of seed maturation genes. Plant Biotechnol J, 13:811-820. PubMed | DOI

Thazar-Poulot N, Miquel M, Fobis-Loisy I, Gaude T (2015). Peroxisome extensions deliver the Arabidopsis SDP1 lipase to oil bodies. Proc Natl Acad Sci U S A, 112:4158-4163. PubMed | DOI

Xu W, Dubos C, Lepiniec L (2015). Transcriptional control of flavonoid biosynthesis by MYB-bHLH-WDR complexes. Trends Plant Sci, 20:176-185. PubMed | DOI

Ayme L, Baud S, Dubreucq B, Joffre F, Chardot T (2014). Function and localization of the Arabidopsis thaliana diacylglycerol acyltransferase DGAT2 expressed in yeast. PLoS One, 9:e92237. PubMed | DOI

Barthole G, To A, Marchive C, Brunaud V, Soubigou-Taconnat L, Berger N, Dubreucq B, Lepiniec L, Baud S (2014). MYB118 represses endosperm maturation in seeds of Arabidopsis. Plant Cell, 26:3519-3537. PubMed | DOI

David LC, Dechorgnat J, Berquin P, Routaboul JM, Debeaujon I, Daniel-Vedele F, Ferrario-Méry S (2014). Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7. J Exp Bot, 65:885-893. PubMed | DOI

Denay G, Creff A, Moussu S, Wagnon P, Thévenin J, Gerentes MF, Chambrier P, Dubreucq B, Ingram G (2014). Endosperm breakdown in Arabidopsis requires heterodimers of the basic helix-loop-helix proteins ZHOUPI and INDUCER OF CBP EXPRESSION 1. Development, 141:1222-1227. PubMed | DOI

Dubos C, Kelemen Z, Sebastian A, Bulow L, Huep G, Xu W, Grain D, Salsac F, Brousse C, Lepiniec L, Weisshaar B, Contreras-Moreira B, Hehl R (2014). Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. BMC Genomics, 15:317. PubMed | DOI

Dugail I, Kalopissis A, Miquel M, Rainteau D, Zachowski A, Forest C (2014). Lipids in metabolic diseases. Biochimie, 96:1-2. PubMed | DOI

Magnani E, De Klein N, Nam HI, Kim JG, Pham K, Fiume E, Mudgett MB, Rhee SY (2014). A comprehensive analysis of microProteins reveals their potentially widespread mechanism of transcriptional regulation. Plant Physiol, 165:149-159. PubMed | DOI

Marchive C, Nikovics K, To A, Lepiniec L, Baud S (2014). Transcriptional regulation of fatty acid production in higher plants: Molecular bases and biotechnological outcomes. European Journal of Lipid Science and Technology, 116:1332-1343. PubMed | DOI

Masclaux-Daubresse C, Clément G, Anne P, Routaboul JM, Guiboileau A, Soulay F, Shirasu K, Yoshimoto K (2014). Stitching together the Multiple Dimensions of Autophagy Using Metabolomics and Transcriptomics Reveals Impacts on Metabolism, Development, and Plant Responses to the Environment in Arabidopsis. Plant Cell, 26:1857-1877. PubMed | DOI

Miquel M, Trigui G, D'Andrea S, Kelemen Z, Baud S, Berger A, Deruyffelaere C, Trubuil A, Lepiniec L, Dubreucq B (2014). Specialization of oleosins in oil body dynamics during seed development in Arabidopsis seeds. Plant Physiol, 164:1866-1878. PubMed | DOI

Simons M, Saha R, Amiour N, Kumar A, Guillard L, Clément G, Miquel M, Li Z, Mouille G, Lea PJ, Hirel B, Maranas CD (2014). Assessing the metabolic impact of nitrogen availability using a compartmentalized maize leaf genome-scale model. Plant Physiol, 166:1659-1674. PubMed | DOI

Xu W, Grain D, Bobet S, Le Gourrierec J, Thévenin J, Kelemen Z, Lepiniec L, Dubos C (2014). Complexity and robustness of the flavonoid transcriptional regulatory network revealed by comprehensive analyses of MYB-bHLH-WDR complexes and their targets in Arabidopsis seed. New Phytol, 202:132-144. PubMed | DOI

Xu W, Lepiniec L, Dubos C (2014). New insights toward the transcriptional engineering of proanthocyanidin biosynthesis. Plant Signal Behav, 9:e28736. PubMed | DOI

Li-Beisson Y, Shorrosh B, Beisson F, Andersson MX, Arondel V, Bates PD, Baud S, Bird D, Debono A, Durrett TP, Franke RB, Graham IA, Katayama K, Kelly AA, Larson T, Markham JE, Miquel M, Molina I, Nishida I, Rowland O, Samuels L, Schmid KM, Wada H, Welti R, Xu C, Zallot R, Ohlrogge J (2013). Acyl-lipid metabolism. Arabidopsis Book, 11:e0161. PubMed | DOI

Schaart JG, Dubos C, Romero De La Fuente I, Van Houwelingen AM, De Vos RC, Jonker HH, Xu W, Routaboul JM, Lepiniec L, Bovy AG (2013). Identification and characterization of MYB-bHLH-WD40 regulatory complexes controlling proanthocyanidin biosynthesis in strawberry (Fragaria x ananassa) fruits. New Phytol, 197:454-467. PubMed | DOI

Xu W, Grain D, Le Gourrierec J, Harscoet E, Berger A, Jauvion V, Scagnelli A, Berger N, Bidzinski P, Kelemen Z, Salsac F, Baudry A, Routaboul JM, Lepiniec L, Dubos C (2013). Regulation of flavonoid biosynthesis involves an unexpected complex transcriptional regulation of TT8 expression, in Arabidopsis. New Phytol, 198:59-70. PubMed | DOI

Barthole G, Lepiniec L, Rogowsky PM, Baud S (2012). Controlling lipid accumulation in cereal grains. Plant Sci, 185-186:33-39. PubMed | DOI

Berger N, Dubreucq B (2012). Evolution goes GAGA: GAGA binding proteins across kingdoms. Biochim Biophys Acta, 1819:863-868. PubMed | DOI

Cubillos FA, Yansouni J, Khalili H, Balzergue S, Elftieh S, Martin-Magniette ML, Serrand Y, Lepiniec L, Baud S, Dubreucq B, Renou JP, Camilleri C, Loudet O (2012). Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures. BMC Genomics, 13:117. PubMed | DOI

Guillon F, Larre C, Petipas F, Berger A, Moussawi J, Rogniaux H, Santoni A, Saulnier L, Jamme F, Miquel M, Lepiniec L, Dubreucq B (2012). A comprehensive overview of grain development in Brachypodium distachyon variety Bd21. J Exp Bot, 63:739-755. PubMed | DOI

Jasinski S, Lécureuil A, Miquel M, Loudet O, Raffaele S, Froissard M, Guerche P (2012). Natural variation in seed very long chain fatty acid content is controlled by a new isoform of KCS18 in Arabidopsis thaliana. PLoS One, 7:e49261. PubMed | DOI

Romano JM, Dubos C, Prouse MB, Wilkins O, Hong H, Poole M, Kang KY, Li E, Douglas CJ, Western TL, Mansfield SD, Campbell MM (2012). AtMYB61, an R2R3-MYB transcription factor, functions as a pleiotropic regulator via a small gene network. New Phytol, 195:774-786. PubMed | DOI

Routaboul JM, Dubos C, Beck G, Marquis C, Bidzinski P, Loudet O, Lepiniec L (2012). Metabolite profiling and quantitative genetics of natural variation for flavonoids in Arabidopsis. J Exp Bot, 63:3749-3764. PubMed | DOI

Thévenin J, Dubos C, Xu W, Le Gourrierec J, Kelemen Z, Charlot F, Nogué F, Lepiniec L, Dubreucq B (2012). A new system for fast and quantitative analysis of heterologous gene expression in plants. New Phytol, 193:504-512. PubMed | DOI

To A, Joubes J, Barthole G, Lécureuil A, Scagnelli A, Jasinski S, Lepiniec L, Baud S (2012). WRINKLED transcription factors orchestrate tissue-specific regulation of fatty acid biosynthesis in Arabidopsis. Plant Cell, 24:5007-5023. PubMed | DOI

Trigui G, Laroche B, Miquel M, Dubreucq B, Trubuil A (2012). The dynamics of oil bodies in Arabidopsis thaliana seeds : a mathematical model of biogenesis and coalescence. World Academy of Science, Engineering and Technology, 64:763-768. PubMed | DOI

Berger N, Dubreucq B, Roudier F, Dubos C, Lepiniec L (2011). Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE, a cis-element that regulates trimethylation of histone H3 at lysine-27. Plant Cell, 23:4065-4078. PubMed | DOI

Pouvreau B, Baud S, Vernoud V, Morin V, Py C, Gendrot G, Pichon JP, Rouster J, Paul W, Rogowsky PM (2011). Duplicate maize Wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis. Plant Physiol, 156:674-686. PubMed | DOI

Roudier F, Ahmed I, Berard C, Sarazin A, Mary-Huard T, Cortijo S, Bouyer D, Caillieux E, Duvernois-Berthet E, Al-Shikhley L, Giraut L, Despres B, Drevensek S, Barneche F, Derozier S, Brunaud V, Aubourg S, Schnittger A, Bowler C, Martin-Magniette ML, Robin S, Caboche M, Colot V (2011). Integrative epigenomic mapping defines four main chromatin states in Arabidopsis. EMBO J, 30:1928-1938. PubMed | DOI

Auger B, Marnet N, Gautier V, Maia-Grondard A, Leprince F, Renard M, Guyot S, Nesi N, Routaboul JM (2010). A detailed survey of seed coat flavonoids in developing seeds of Brassica napus L. J Agric Food Chem, 58:6246-6256. PubMed | DOI

Baud S, Feria-Bourrellier AB, Azzopardi M, Berger A, Dechorgnat J, Daniel-Vedele F, Lepiniec L, Miquel M, Rochat C, Hodges M, Ferrario-Méry S (2010). PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana. Plant J, 64:291-303. PubMed | DOI

Baud S, Lepiniec L (2010). Physiological and developmental regulation of seed oil production. Prog Lipid Res, 49:235-249. PubMed | DOI

Caboche M (2010). Specificities of plant development. C R Biol, 333:288-289. PubMed | DOI