Publications

Ingargiola C, Jéhanno I, Forzani C, Marmagne A, Broutin J, Clément G, Leprince AS, Meyer C (2023). The Arabidopsis Target of Rapamycin (TOR) kinase regulates ammonium assimilation and glutamine metabolism. Plant Physiol, kiad216. PubMed | DOI

Smokvarska M, Bayle V, Maneta-Peyret L, Fouillen L, Poitout A, Dongois A, Fiche JB, Gronnier J, Garcia J, Höfte H, Nolmann M, Zipfel C, Maurel C, Moreau P, Jaillais Y, Martiniere A (2023). The receptor kinase FERONIA regulates phosphatidylserine localization at the cell surface to modulate ROP signaling. Sci Adv, 9(14):eadd4791. PubMed | DOI

Limami AM, Cukier C, Hirel B (2023). 15N-labelling of Leaves Combined with GC-MS Analysis as a Tool for Monitoring the Dynamics of Nitrogen Incorporation into Amino Acids. Methods Mol Biol, 2642:151-161. PubMed | DOI

Soulhat C, Wehbi H, Fierlej Y, Berquin P, Girin T, Hilson P, Bouchabké-Coussa O (2023). Fast-track transformation and genome editing in Brachypodium distachyon. Plant Methods, 19(1):31. PubMed | DOI

Bazin J, Elvira Matelot E, Blein T, Jauvion V, Bouteiller N, Cao J, Crespi M, Vaucheret H (2023). Synergistic action of the Arabidopsis spliceosome components PRP39a and SmD1b in promoting post-transcriptional transgene silencing. Plant Cell, koad091. PubMed | DOI

Barbosa ICR, De Bellis D, Flückiger I, Bellani E, Grangé-Guerment M, Hématy K, Geldner N (2023). Directed growth and fusion of membrane-wall microdomains requires CASP-mediated inhibition and displacement of secretory foci. Nat Commun, 14(1):1626. PubMed | DOI

Bellec A, Sow MD, Pont C, Civan P, Mardoc E, Duchemin W, Armisen D, Huneau C, Thévenin J, Vernoud V, Depege-Fargeix N, Maunas L, Escale B, Dubreucq B, Rogowsky PM, Berges H, Salse J (2023). Tracing 100 million years of grass genome evolutionary plasticity. Plant J, doi: 10.1111/tpj.16185. PubMed | DOI

Main O, Jacquemot MP, Griveau Y, Guillaume S, Demonceaux C, Lopez-Marnet PL, Rey S, Fargier S, Sartre P, Montagnier C, Uijttewaal A, Mangel N, Meunier F, Reymond M, Méchin V, Coursol S (2023). Precise control of water stress in the field reveals different response thresholds for forage yield and digestibility of maize hybrids. Front Plant Sci, 14:1142462. PubMed | DOI

Liu C, Yu H, Voxeur A, Rao X, Dixon RA (2023). FERONIA and wall-associated kinases coordinate defense induced by lignin modification in plant cell walls. Sci Adv, 9(10):eadf7714. PubMed | DOI

An X, Totozafy JC, Peaucelle A, Jones CY, Willats WGT, Höfte H, Corso M, Verbruggen N (2023). Contrasting Cd accumulation of Arabidopsis halleri populations: a role for (1→4)-β-galactan in pectin. J Hazard Mater, 445:130581. PubMed | DOI

Sterken MG, Nijveen H, van Zanten M, Jiménez-Gómez JM, Geshnizjani N, Willems LaJ, Rienstra J, Hilhorst HWM, Ligterink W, Snoek BL (2023). Plasticity of maternal environment-dependent expression-QTLs of tomato seeds. Theor Appl Genet, 136(2):28. PubMed | DOI

Dadashzadeh A, Moghassemi S, Peaucelle A, Lucci CM, Amorim CA (2023). Mind the mechanical strength: tailoring a 3D matrix to encapsulate isolated human preantral follicles. Hum Reprod Open, 2023(2):hoad004. PubMed | DOI

Garcias-Morales D, Palomar VM, Charlot F, Nogué F, Covarrubias AA, Reyes JL (2023). N6 -Methyladenosine modification of mRNA contributes to the transition from 2D to 3D growth in the moss Physcomitrium patens. Plant J, doi: 10.1111/tpj.16149. PubMed | DOI

Höfte H (2023). A dive into the cell wall with Arabidopsis. C R Biol, 345(4):41-60. PubMed | DOI

Baud S, Corso M, Debeaujon I, Dubreucq B, Job D, Marion-Poll A, Miquel M, North HM, Rajjou L, Lepiniec L (2023). Recent progress in molecular genetics and omics-driven research in seed biology. C R Biol, 345(4):61-110. PubMed | DOI

Vaucheret H (2023). Epigenetic management of self and non-self: lessons from 40 years of transgenic plants. C R Biol, 345(4):149-174. PubMed | DOI

Elfarargi AF, Gilbault E, Döring N, Neto C, Fulgione A, Weber APM, Loudet O, Hancock AM (2023). Genomic basis of adaptation to a novel precipitation regime. Mol Biol Evol, msad031. PubMed | DOI

Bělíček J, Ľuptáková, Kopecný D, Frömmel J, Vigouroux A, Ćavar Zeljković S, Jagic F, Briozzo P, Kopečný DJ, Tarkowski P, Nisler J, De Diego N, Moréra S, Kopecná M (2023). Biochemical and structural basis of polyamine, lysine and ornithine acetylation catalyzed by spermine/spermidine N-acetyl transferase in moss and maize. Plant J, doi: 10.1111/tpj.16148. PubMed | DOI

Durand M, Bréhaut V, Clément G, Kelemen Z, Macé J, Feil R, Duville G, Launay-Avon A, Paysant-Le Roux C, Lunn JE, Roudier F, Krapp A (2023). The Arabidopsis transcription factor NLP2 regulates early nitrate responses and integrates nitrate assimilation with energy and carbon skeleton supply. Plant Cell, koad025. PubMed | DOI

Vachon J, Assad-Alkhateb D, de Araujo Hsia L, Lora JH, Baumberger S (2023). Effect of compatibilizers on polyethylene-eucalyptus lignin blends. J Appl Polym Sci, 140: e53695. DOI

PlantACT [...], Chardon F, Krapp A (2023). PlantACT! - how to tackle the climate crisis. Trends Plant Sci, S1360-1385(23)00024-9. PubMed | DOI

Oughou M, Biot E, Arnaud N, Maugarny A, Laufs P, Andrey P, Burguet J (2023). Model-based reconstruction of whole organ growth dynamics reveals invariant patterns in leaf morphogenesis. Quant Plant Biol, 4:e1, 1-11. DOI

Kuroiwa K, Danilo B, Perrot L, Thenault C, Veillet F, Delacote F, Duchateau F, Nogué F, Mazier M, Gallois JL (2023). An iterative gene-editing strategy broadens eIF4E1 genetic diversity in Solanum lycopersicum and generates resistance to multiple potyvirus isolates. Plant Biotechnol J, doi: 10.1111/pbi.14003. PubMed | DOI

Scott CB, Mjolsness E, Oyen D, Kodera C, Uyttewaal M, Bouchez D (2023). Graph metric learning quantifies morphological differences between two genotypes of shoot apical meristem cells in Arabidopsis. in silico Plants, 5: 1. DOI

Sehki H, Yu A, Elmayan T, Vaucheret H (2023). TYMV and TRV infect Arabidopsis thaliana by expressing weak suppressors of RNA silencing and inducing host RNASE THREE LIKE1. PLoS Pathog, 19(1):e1010482. PubMed | DOI

Shafiei R, Hooper M, Mcclellan C, Oakey H, Stephens J, Lapierre C, Tsuji Y, Goeminne G, Vanholme R, Boerjan W, Ralph J, Halpin C (2023). Downregulation of barley ferulate 5-hydroxylase dramatically alters straw lignin structure without impact on mechanical properties. Front Plant Sci, 13:1125003. PubMed | DOI

de L TovillaCoutino M, Passot S, Trelea IC, Ropers MH, Gohon Y, Fonseca F (2023). Multi-objective optimization of frozen and freeze-dried Lactobacillus delbrueckii subsp. bulgaricus CFL1 production via the modification of fermentation conditions. J Appl Microbiol, lxad003. PubMed | DOI

Mazoyon C, Hirel B, Pecourt A, Catterou M, Gutierrez L, Sarazin A, Dubois F, Duclercq J (2023). Sphingomonas sediminicola Is an Endosymbiotic Bacterium Able to Induce the Formation of Root Nodules in Pea (Pisum sativum L.) and to Enhance Plant Biomass Production. Microorganisms, 11(1):199. PubMed | DOI

Kunkowska AB, Fontana F, Betti F, Soeur R, Beckers GJM, Meyer C, De Jaeger G, Weits DA, Loreti E, Perata P (2023). Target of rapamycin signaling couples energy to oxygen sensing to modulate hypoxic gene expression in Arabidopsis. Proc Natl Acad Sci,120(3):e2212474120. PubMed | DOI

Safran J, Ung V, Bouckaert J, Habrylo O, Molinie R, Fontaine JX, Lemaire A, Voxeur A, Pilard S, Pau-Roblot C, Mercadante D, Pelloux J, Sénéchal F (2023). The specificity of pectate lyase VdPelB from Verticilium dahliae is highlighted by structural, dynamical and biochemical characterizations. Int J Biol Macromol, 123137. PubMed | DOI

Beraldo C, Guyon-Debast A, Alboresi A, Nogué F, Morosinotto T (2023). Functional analysis of PsbS transmembrane domains through base editing in Physcomitrium patens. Plant J, doi: 10.1111/tpj.16099. PubMed | DOI

Lopez C, Sotin H, Rabesona H, Novales B, Le Quéré JM, Froissard M, Faure JD, Guyot S, Anton M (2023). Oil Bodies from Chia (Salvia hispanica L.) and Camelina (Camelina sativa L.) Seeds for Innovative Food Applications: Microstructure, Composition and Physical Stability. Foods, 12(1):211. PubMed | DOI

Zheng Y, Cabassa-Hourton C, Planchais S, Crilat E, Clément G, Dacher M, Durand N, Bordenave-Jacquemin M, Guivarc'h A, Dourmap C, Carol P, Lebreton S, Savoure A (2022). Pyrroline-5-carboxylate dehydrogenase is an essential enzyme for proline dehydrogenase function during dark-induced senescence in Arabidopsis thaliana. Plant Cell Environ, doi: 10.1111/pce.14529. PubMed | DOI

Xiao G, Kumar Ro, Komuro Y, Burguet J, Kakarla V, Azizkhanian I, Sheth SA, Williams CK, Zhang XR, Macknicki R, Brumm A, Kawaguchi R, Mai P, Kaneko N, Vinters HV, Carmichael ST, Havton LA, DeCarli C, Hinman JD (2022). IL-17/CXCL5 signaling within the oligovascular niche mediates human and mouse white matter injury. Cell Rep, 41(12):111848. PubMed | DOI

Dourmap C, Marmagne A, Lebreton S, Clément G, Guivarc'h A, Savoure A, Masclaux-Daubresse C (2022). Carbon and nitrogen remobilization during seed filling is strongly impaired in pyrroline-5-carboxylate dehydrogenase mutant. J Exp Bot, erac499. PubMed | DOI

Limami A, Hirel B, Lothier J (2022). Does Potassium (K+) Contribute to High-Nitrate (NO3-) Weakening of a Plant's Defense System against Necrotrophic Fungi?. Int J Mol Sci, 23(24):15631. PubMed | DOI

Nagel M, Arc E., Rajjou L, Cueff G, Bailly M, Clément G, Sanchez-Vicente I, Bailly C, Seal CE, Roach T, Rolletschek H, Lorenzo O, Borner A, Kranner I (2022). Impacts of drought and elevated temperature on the seeds of malting barley. Front Plant Sci, 13:1049323. PubMed | DOI

Matar N, Macadré C, Ammar GAG, Peres A, Collet B, El Boustany N, Rajjou L, As-Sadi F, Dufresne M, Ratet P (2022). Identification of beneficial Lebanese Trichoderma spp. wheat endophytes. Front Plant Sci, 13:1017890. PubMed | DOI

Burgess AJ, Masclaux-Daubresse C, Strittmatter G, Weber APM, Taylor SH, Harbinson J, Yin X, Long S, Paul MJ, Westhoff P, Loreto F, Ceriotti A, Saltenis VLR, Pribil M, Nacry P, Scharff LB, Jensen PE, Muller B, Cohan JP, Foulkes J, Rogowsky PM, Debaeke P, Meyer C, Nelissen H, Inzé D, Lankhorst RK, Parry MAJ, Murchie EH, Baekelandt A (2022). Improving crop yield potential: Underlying biological processes and future prospects. Food Energy Secur, 12(1):e435. PubMed | DOI

Laruelle E, Belcram K, Trubuil A, Palauqui JC, Andrey P (2022). Large-scale analysis and computer modeling reveal hidden regularities behind variability of cell division patterns in Arabidopsis thaliana embryogenesis. Elife, 11:e79224. PubMed | DOI

Hoffmann B, Aubry E, Marmagne A, Dinant S, Chardon F, Le Hir R (2022). Impairment of sugar transport in the vascular system acts on nitrogen remobilisation and nitrogen use efficiency in Arabidopsis. Physiol Plant, e13830. PubMed | DOI

Hodin J, Lind C, Marmagne A, Espagne C, Bianchi MW, De Angeli A, Abou-Choucha F, Bourge M, Chardon F, Thomine S, Filleur S (2022). Proton exchange by the vacuolar nitrate transporter CLCa is required for plant growth and nitrogen use efficiency. Plant Cell, koac325. PubMed | DOI

Lopez-Marnet PL, Guillaume S, Méchin V, Reymond M (2022). A robust and efficient automatic method to segment maize FASGA stained stem cross section images to accurately quantify histological profile. Plant Methods, 18(1):125. PubMed | DOI

Pautot V, Berbel A, Cayla T, Eschstruth A, Adroher B, Ratet P, Madueño F, Laufs P (2022). Arabidopsis thaliana SHOOT MERISTEMLESS Substitutes for Medicago truncatula SINGLE LEAFLET1 to Form Complex Leaves and Petals. Int J Mol Sci, 23(22):14114. PubMed | DOI

Rozière J, Guichard C, Brunaud V, Martin-Magniette ML, Coursol S (2022). A comprehensive map of preferentially located motifs reveals distinct proximal cis-regulatory sequences in plants. Front Plant Sci, 13:976371. PubMed | DOI

Kidwai M, Mishra P, Bellini C (2022). Species-specific transcriptional reprogramming during adventitious root initiation. Trends Plant Sci, S1360-1385(22)00302-8. PubMed | DOI

Jacquens L, Trouvelot S, Lemaître-Guillier C, Krzyzaniak Y, Clément G, Citerne S, Mouille G, Moreau E, Heloir MC, Adrian M (2022). Biostimulation can prime elicitor induced resistance of grapevine leaves to downy mildew. Front Plant Sci, 13:998273. PubMed | DOI

Nicolas A, Laufs P (2022). The NGATHA-like Genes DPA4 and SOD7 Are Not Required for Stem Cell Specification during Embryo Development in Arabidopsis thaliana. Int J Mol Sci, 23(19):12007. PubMed | DOI

Durand S, Lian Q, Jing J, Ernst M, Grelon M, Zwicker D, Mercier R (2022). Joint control of meiotic crossover patterning by the synaptonemal complex and HEI10 dosage. Nat Commun, 13(1):5999. PubMed | DOI

Chardot T (2022). A comparison of natural and induced diversity in plant oils. OCL, 29:34. DOI