Research departments

Physiology and Interactions

PHI 6 research teams

IJPB publications (2006-to date)
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Brusamarello-Santos LC, Gilard F, Brulé L, Quilleré I, Gourion B, Ratet P, Maltempi De Souza E, Lea PJ, Hirel B (2017). Metabolic profiling of two maize (Zea mays L.) inbred lines inoculated with the nitrogen fixing plant-interacting bacteria Herbaspirillum seropedicae and Azospirillum brasilense. PLoS One, 12:e0174576. PubMed | DOI
Cañas RA, Yesbergenova-Cuny Z, Simons M, Chardon F, Armengaud P, Quilleré I, Cukier C, Gibon Y, Limami AM, Nicolas S, Brulé L, Lea PJ, Maranas CD, Hirel B (2017). Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield. Plant Cell, 29:919-943. PubMed | DOI
Habbib H, Hirel B, Verzeaux J, Roger D, Lacoux J, Lea P, Dubois F, Tétu T (2017). Investigating the Combined Effect of Tillage, Nitrogen Fertilization and Cover Crops on Nitrogen Use Efficiency in Winter Wheat. Agronomy, 7:66. PubMed | DOI
Verzeaux J, Hirel B, Dubois F, Lea PJ, Tétu T (2017). Agricultural practices to improve nitrogen use efficiency through the use of arbuscular mycorrhizae: Basic and agronomic aspects. Plant Sci, 264:48-56. PubMed | DOI
Verzeaux J, Nivelle E, Roger D, Hirel B, Dubois F, Tétu T (2017). Spore Density of Arbuscular Mycorrhizal Fungi is Fostered by Six Years of a No-Till System and is Correlated with Environmental Parameters in a Silty Loam Soil. Agronomy, 7:38. PubMed | DOI
Rigault M, Buellet A, Masclaux-Daubresse C, Fagard M, Chardon F, Dellagi A (2017). Quantitative Methods to Assess Differential Susceptibility of Arabidopsis thaliana Natural Accessions to Dickeya dadantii. Front Plant Sci, 8:394. PubMed | DOI
Zarattini M, Launay A, Farjad M, Wenes E, Taconnat L, Boutet S, Bernacchia G, Fagard M (2017). The bile acid deoxycholate elicits defences in Arabidopsis and reduces bacterial infection. Mol Plant Pathol, 18:540-554. PubMed | DOI
Al Hafi M, El Beyrouthy M, Ouaini N, Stien D, Rutledge D, Chaillou S (2017). Chemical Composition and Antimicrobial Activity of Satureja, Thymus, and Thymbra Species Grown in Lebanon. Chem Biodivers, 14:e1600236. PubMed | DOI
Chardin C, Schenk ST, Hirt H, Colcombet J, Krapp A (2017). Review: Mitogen-Activated Protein Kinases in nutritional signaling in Arabidopsis. Plant Sci, 260:101-108. PubMed | DOI
Le Hir R, Castelain M, Chakraborti D, Moritz T, Dinant S, Bellini C (2017). AtbHLH68 transcription factor contributes to the regulation of ABA homeostasis and drought stress tolerance in Arabidopsis thaliana. Physiol Plant, 160:312-327. PubMed | DOI
Pacurar DI, Pacurar ML, Lakehal A, Pacurar AM, Ranjan A, Bellini C (2017). The Arabidopsis Cop9 signalosome subunit 4 (CNS4) is involved in adventitious root formation. Sci Rep, 7:628. PubMed | DOI
Baldy A, Jacquemot MP, Griveau Y, Bauland C, Reymond M, Méchin V (2017). Energy Values of Registered Corn Forage Hybrids in France over the Last 20 Years Rose in a Context of Maintained Yield Increase. American Journal of Plant Sciences, 08:1449-1461. PubMed | DOI
Grantham NJ, Wurman-Rodrich J, Terrett OM, Lyczakowski JJ, Stott K, Iuga D, Simmons TJ, Durand-Tardif M, Brown SP, Dupree R, Busse-Wicher M, Dupree P (2017). An even pattern of xylan substitution is critical for interaction with cellulose in plant cell walls. Nat Plants, 3:859-865. PubMed | DOI
Legland D, El Hage F, Méchin V, Reymond M (2017). Histological quantification of maize stem sections from FASGA-stained images. Plant Methods, 13:84. PubMed | DOI
Voxeur A, Soubigou-Taconnat L, Legée F, Sakai K, Antelme S, Durand-Tardif M, Lapierre C, Sibout R (2017). Altered lignification in mur1-1 a mutant deficient in GDP-L-fucose synthesis with reduced RG-II cross linking. PLoS One, 12:e0184820. PubMed | DOI
Avila-Ospina L, Clément G, Masclaux-Daubresse C (2017). Metabolite Profiling for Leaf Senescence in Barley Reveals Decreases in Amino Acids and Glycolysis Intermediates. Agronomy, 7:15. PubMed | DOI
Gaufichon L, Marmagne A, Belcram K, Yoneyama T, Sakakibara Y, Hase T, Grandjean O, Clément G, Citerne S, Boutet S, Masclaux-Daubresse C, Chardon F, Soulay F, Xu X, Trassaert M, Shakiebaei M, Najihi A, Suzuki A (2017). ASN1-encoded asparagine synthetase in floral organs contributes to nitrogen filling in Arabidopsis seeds. Plant J, 91:371-393. PubMed | DOI
Have M, Marmagne A, Chardon F, Masclaux-Daubresse C (2017). Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. J Exp Bot, 68:2513-2529. PubMed | DOI
Masclaux-Daubresse C, Chen Q, Have M (2017). Regulation of nutrient recycling via autophagy. Curr Opin Plant Biol, 39:8-17. PubMed | DOI
Cormier F, Foulkes J, Hirel B, Gouache D, Moënne-Loccoz Y, Le Gouis J, Ordon F (2016). Breeding for increased nitrogen-use efficiency: a review for wheat (T. aestivumL.). Plant Breeding, 135:255-278. PubMed | DOI
Habbib H, Verzeaux J, Nivelle E, Roger D, Lacoux J, Catterou M, Hirel B, Dubois F, Tétu T (2016). Conversion to No-Till Improves Maize Nitrogen Use Efficiency in a Continuous Cover Cropping System. PLoS One, 11:e0164234. PubMed | DOI
Hirel B, Krapp A (2016). Special Issue: Nitrogen Transport and Assimilation in Plants. Agronomy, 6:41. PubMed | DOI
Verzeaux J, Alahmad A, Habbib H, Nivelle E, Roger D, Lacoux J, Decocq G, Hirel B, Catterou M, Spicher F, Dubois F, Duclercq J, Tétu T (2016). Cover crops prevent the deleterious effect of nitrogen fertilisation on bacterial diversity by maintaining the carbon content of ploughed soil. Geoderma, 281:49-57. PubMed | DOI
Verzeaux J, Roger D, Lacoux J, Nivelle E, Adam C, Habbib H, Hirel B, Dubois F, Tétu T (2016). In Winter Wheat, No-Till Increases Mycorrhizal Colonization thus Reducing the Need for Nitrogen Fertilization. Agronomy, 6:38. PubMed | DOI
Yesbergenova-Cuny Z, Dinant S, Martin-Magniette ML, Quilleré I, Armengaud P, Monfalet P, Lea PJ, Hirel B (2016). Genetic variability of the phloem sap metabolite content of maize (Zea mays L.) during the kernel-filling period. Plant Sci, 252:347-357. PubMed | DOI
Jasinski S, Lécureuil A, Durandet M, Bernard-Moulin P, Guerche P (2016). Arabidopsis Seed Content QTL Mapping Using High-Throughput Phenotyping: The Assets of Near Infrared Spectroscopy. Front Plant Sci, 7:1682. PubMed | DOI
Goncalves IR, Brouillet S, Soulie MC, Gribaldo S, Sirven C, Charron N, Boccara M, Choquer M (2016). Genome-wide analyses of chitin synthases identify horizontal gene transfers towards bacteria and allow a robust and unifying classification into fungi. BMC Evol Biol, 16:252. PubMed | DOI
Launay A, Patrit O, Wenes E, Fagard M (2016). DspA/E Contributes to Apoplastic Accumulation of ROS in Non-host A. thaliana. Front Plant Sci, 7:545. PubMed | DOI
David LC, Berquin P, Kanno Y, Seo M, Daniel-Vedele F, Ferrario-Méry S (2016). N availability modulates the role of NPF3.1, a gibberellin transporter, in GA-mediated phenotypes in Arabidopsis. Planta, 244:1315-1328. PubMed | DOI
Dobrenel T, Caldana C, Hanson J, Robaglia C, Vincentz M, Veit B, Meyer C (2016). TOR Signaling and Nutrient Sensing. Annu Rev Plant Biol, 67:261-285. PubMed | DOI
Dobrenel T, Mancera-Martinez E, Forzani C, Azzopardi M, Davanture M, Moreau M, Schepetilnikov M, Chicher J, Langella O, Zivy M, Robaglia C, Ryabova LA, Hanson J, Meyer C (2016). The Arabidopsis TOR Kinase Specifically Regulates the Expression of Nuclear Genes Coding for Plastidic Ribosomal Proteins and the Phosphorylation of the Cytosolic Ribosomal Protein S6. Front Plant Sci, 7:1611. PubMed | DOI
Kiba T, Krapp A (2016). Plant Nitrogen Acquisition Under Low Availability: Regulation of Uptake and Root Architecture. Plant Cell Physiol, 57:707-714. PubMed | DOI
Truong HN, Meyer C (2016). A new NO ledge in Chlamydomonas: when the old nitrate reductase meets amidoxime reducing component to produce nitric oxide. Plant Cell Environ, 39:2095-2096. PubMed | DOI
Yan D, Easwaran V, Chau V, Okamoto M, Ierullo M, Kimura M, Endo A, Yano R, Pasha A, Gong Y, Bi YM, Provart N, Guttman D, Krapp A, Rothstein SJ, Nambara E (2016). NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis. Nat Commun, 7:13179. PubMed | DOI
Zgheib R, Chaillou S, Ouaini N, Kassouf A, Rutledge D, El Azzi D, El Beyrouthy M (2016). Chemometric Tools to Highlight the Variability of the Chemical Composition and Yield of Lebanese Origanum syriacum L. Essential Oil. Chem Biodivers, 13:1326-1347. PubMed | DOI
Zhang Z, Zhu JY, Roh J, Marchive C, Kim SK, Meyer C, Sun Y, Wang W, Wang ZY (2016). TOR Signaling Promotes Accumulation of BZR1 to Balance Growth with Carbon Availability in Arabidopsis. Curr Biol, 26:1854-1860. PubMed | DOI
De Marco F, Pagliari L, Degola F, Buxa SV, Loschi A, Dinant S, Le Hir R, Morin H, Santi S, Musetti R (2016). Combined microscopy and molecular analyses show phloem occlusions and cell wall modifications in tomato leaves in response to 'Candidatus Phytoplasma solani'. J Microsc, 263:212-225. PubMed | DOI
Avila-Ospina L, Marmagne A, Soulay F, Masclaux-Daubresse C (2016). Identification of Barley (Hordeum vulgare L.) Autophagy Genes and Their Expression Levels during Leaf Senescence, Chronic Nitrogen Limitation and in Response to Dark Exposure. Agronomy, 6:15. PubMed | DOI
Gaufichon L, Marmagne A, Yoneyama T, Hase T, Clément G, Trassaert M, Xu X, Shakibaei M, Najihi A, Suzuki A (2016). Impact of the Disruption of ASN3-Encoding Asparagine Synthetase on Arabidopsis Development. Agronomy, 6:12. PubMed | DOI
Gaufichon L, Rothstein SJ, Suzuki A (2016). Asparagine Metabolic Pathways in Arabidopsis. Plant Cell Physiol, 57:675-689. PubMed | DOI
Hachiya T, Ueda N, Kitagawa M, Hanke G, Suzuki A, Hase T, Sakakibara H (2016). Arabidopsis Root-Type Ferredoxin:NADP(H) Oxidoreductase 2 is Involved in Detoxification of Nitrite in Roots. Plant Cell Physiol, 57:2440-2450. PubMed | DOI
Masclaux-Daubresse C (2016). Autophagy controls carbon, nitrogen, and redox homeostasis in plants. Autophagy, 12:896-897. PubMed | DOI
Terce-Laforgue T, Clément G, Marchi L, Restivo FM, Lea PJ, Hirel B (2015). Resolving the Role of Plant NAD-Glutamate Dehydrogenase: III. Overexpressing Individually or Simultaneously the Two Enzyme Subunits Under Salt Stress Induces Changes in the Leaf Metabolic Profile and Increases Plant Biomass Production. Plant Cell Physiol, 56:1918-1929. PubMed | DOI
Aznar A, Chen NW, Thomine S, Dellagi A (2015). Immunity to plant pathogens and iron homeostasis. Plant Sci, 240:90-97. PubMed | DOI
Aznar A, Dellagi A (2015). New insights into the role of siderophores as triggers of plant immunity: what can we learn from animals?. J Exp Bot, 66:3001-3010. PubMed | DOI
Aznar A, Patrit O, Berger A, Dellagi A (2015). Alterations of iron distribution in Arabidopsis tissues infected by Dickeya dadantii. Mol Plant Pathol, 16:521-528. PubMed | DOI
Hummel M, Dobrenel T, Cordewener JJ, Davanture M, Meyer C, Smeekens SJ, Bailey-Serres J, America TA, Hanson J (2015). Proteomic LC-MS analysis of Arabidopsis cytosolic ribosomes: Identification of ribosomal protein paralogs and re-annotation of the ribosomal protein genes. J Proteomics, 128:436-449. PubMed | DOI
Krapp A (2015). Plant nitrogen assimilation and its regulation: a complex puzzle with missing pieces. Curr Opin Plant Biol, 25:115-122. PubMed | DOI
Kravchenko A, Citerne S, Jéhanno I, Bersimbaev RI, Veit B, Meyer C, Leprince AS (2015). Mutations in the Arabidopsis Lst8 and Raptor genes encoding partners of the TOR complex, or inhibition of TOR activity decrease abscisic acid (ABA) synthesis. Biochem Biophys Res Commun, 467:992-997. PubMed | DOI
Ouibrahim L, Rubio AG, Moretti A, Montane MH, Menand B, Meyer C, Robaglia C, Caranta C (2015). Potyviruses differ in their requirement for TOR signalling. J Gen Virol, 96:2898-2903. PubMed | DOI
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