Physiology and Interactions

Decouard B, Rigault M, Quilleré I, Boutet S, Adam G, Cueff G, Perreau F, Alunni B, Dellagi A (2025). An aeroponic system to characterize maize root exudates in relation to N and P nutrition and arbuscular mycorrhizal symbiosis. J Exp Bot, eraf356. PubMed | DOI

Zarattini M, Fagard M (2025). Climate change effects on plant immune activation. Trends Plant Sci, S1360-1385(25)00201-8. PubMed | DOI

James M, Nexer E, Girondé A, Masclaux-Daubresse C, Marmagne A, Trouverie J, Etienne P (2025). A Brassica napus water soluble chlorophyll binding protein (WSCP1) delays chlorophyll degradation and inhibits serine proteases during dark-induced leaf senescence in Arabidopsis thaliana. Planta, 262(2):39. PubMed | DOI

Jeridi R, Daviere A, Jolivet S, Zarattini M, Clément G, Soulie MC, Landoulsi A, Fagard M (2025). Apoplast Metabolomics Profiling Reveals Nitrogen-Dependent Modulation of Plant-Pathogen Interactions. Mol Plant Pathol, 26(6):e70110. PubMed | DOI

Armengaud P, De Angeli A, Berquin P, Bréhaut V, Durand M, Daniel-Vedele F, Krapp A, Filleur S (2025). Overexpressing NRT2.7 induces nitrate export from the vacuole and increases growth of Arabidopsis. J Exp Bot, eraf288. PubMed | DOI

David L, Grégoire M, Berquin P, Marmagne A, Dalmais M, Bendahmane A, Miller TJ, Krapp A, Daniel-Vedele F, Girin T, Ferrario-Méry S (2025). BdNRT2A and BdNRT3.2 Are the Major Components of the High-Affinity Nitrate Transport System in Brachypodium distachyon. Plant Direct, 9(6):e7007. PubMed | DOI

James M, Trouverie J, Marmagne A, Chardon F, Frémont J, Etienne P, Masclaux-Daubresse C (2025). Lack or excess of autophagy leads to premature leaf senescence probably due to unbalanced nutrient management. Ann Bot, mcaf050. PubMed | DOI

James M, Masclaux-Daubresse C, Goux D, Jing L, Etienne P, Trouverie J (2025). The Taproot Acts as a Storage Organ During Rapeseed Vernalization. Physiol Plant, 177(3): e70287. PubMed | DOI

Lopez Malvar A, Main O, Guillaume S, Jacquemot MP, Meunier F, Revilla P, Santiago R, Méchin V, Reymond M (2025). Genotype-dependent response to water deficit: increases in maize cell wall digestibility occurs through reducing both p-coumaric acid and lignification of the rind. Front Plant Sci, 16:1571407. PubMed | DOI

Smith NT, Boukherissa A, Antaya K, Howe GW, Mergaert P, Rodríguez de la Vega RC, Shykoff JA, Alunni B, diCenzo GC (2025). Taxonomic distribution of SbmA/BacA and BacA-like antimicrobial peptide transporters suggests independent recruitment and convergent evolution in host-microbe interactions. Microb Genom, 11(4):001380. PubMed | DOI

Marmagne A, Chardon F, Masclaux-Daubresse C (2025). Evidence of the specific roles of autophagy in senescent leaves and maturing seeds. Autophagy Rep, 4(1): 2472160. PubMed | DOI

Bitarishvili SV, Clément G, Meyer C, Volkova PY (2025). Metabolic profiling of Achillea millefolium from the Chernobyl exclusion zone reveals the adaptive strategies to low-dose chronic radiation exposure. Plant Physiol Biochem, 220:109551. PubMed | DOI

Schenk ST, Bréhaut V, Chardin C, Boudsocq M, Marmagne A, Colcombet J, Krapp A (2025). Nitrate activates an MKK3-dependent MAPK module via NLP transcription factors in Arabidopsis. Plant J, 121(4):e70010. PubMed | DOI

Daviere A, Voxeur A, Jolivet S, Lelas L, Vernhettes S, Soulie MC, Fagard M (2025). Unravelling the interplay of nitrogen nutrition and the Botrytis cinerea pectin lyase BcPNL1 in modulating Arabidopsis thaliana susceptibility. Commun Biol, 8(1):204. PubMed | DOI

Rincent R, Solin J, Lorenzi A, Nunes L, Griveau Y, Pirus L, Kermarrec D, Bauland C, Reymond M, Moreau L (2025). Using phenomic selection to predict hybrid values with NIR spectra measured on the parental lines: proof of concept on maize. Theor Appl Genet, 138(1):28. PubMed | DOI

Guérin A, Levasseur C, Herger A, Renggli D, Sotiropoulos AG, Kadler G, Hou X, Schaufelberger M, Meyer C, Wicker T, Bigler L, Ringli C (2024). Histidine limitation alters plant development and influences the TOR network. J Exp Bot, erae479. PubMed | DOI

Marmagne A, Chardon F, Masclaux-Daubresse C (2024). A tissue-specific rescue strategy reveals the local roles of autophagy in leaves and seeds for resource allocation. Plant Physiol, kiae647. PubMed | DOI

Lee J, Hoon Kang M, Choi DM, Marmagne A, Park J, Lee H, Gwak E, Chan Lee J, Kim JI, Masclaux-Daubresse C, Lim PO (2024). Phytochrome-interacting factors PIF4 and PIF5 directly regulate autophagy during leaf senescence in Arabidopsis. J Exp Bot, erae469. PubMed | DOI

Urrutia M, Blein-Nicolas M, Fernandez O, Bernillon S, Maucourt M, Deborde C, Balliau T, Rabier D, Benard C, Prigent S, Quilleré I, Jacob D, Gibon Y, Zivy M, Giauffret C, Hirel B, Moing A (2024). Identification of metabolic and protein markers representative of the impact of mild nitrogen deficit on agronomic performance of maize hybrids. Metabolomics, 20(6):128. PubMed | DOI

Aubry E, Clément G, Gilbault E, Dinant S, Le Hir R (2024). Changes in SWEET-mediated sugar partitioning affect photosynthesis performance and plant response to drought. Physiol Plant, 176(6):e14623. PubMed | DOI

James M, Masclaux-Daubresse C, Balliau T, Marmagne A, Chardon F, Trouverie J, Etienne P (2024). Multi-scale phenotyping of senescence-related changes in roots of Rapeseed in response to nitrate limitation. J Exp Bot, erae417. PubMed | DOI

Regnard S, Otani M, Keruzore M, Teinturier A, Blondel M, Kawakami N, Krapp A, Colcombet J (2024). The MKK3 module integrates nitrate and light signals to modulate secondary dormancy in Arabidopsis thaliana. Proc Natl Acad Sci U S A, 121(40):e2403646121. PubMed | DOI

Xue Z, Ferrand M, Gilbault E, Zurfluh O, Clément G, Marmagne A, Huguet S, Jiménez-Gómez JM, Krapp A, Meyer C, Loudet O (2024). Natural variation in response to combined water and nitrogen deficiencies in Arabidopsis. Plant Cell, koae173. PubMed | DOI

D'Alessandro S, Velay F, Lebrun R, Zafirov D, Mehrez M, Romand S, Saadouni R, Forzani C, Citerne S, Montane MH, Robaglia C, Menand B, Meyer C, Field B (2024). Posttranslational regulation of photosynthetic activity via the TOR kinase in plants. Sci Adv, 10(25):eadj3268. PubMed | DOI

González Ortega-Villaizán A, King E, Patel MK, Pérez-Alonso MM, Scholz SS, Sakakibara H, Kiba T, Kojima M, Takebayashi Y, Ramos P, Morales-Quintana L, Breitenbach S, Smolko A, Salopek-Sondi B, Bauer N, Ludwig-Müller J, Krapp A, Oelmüller R, Vicente-Carbajosa J, Pollmann S (2024). The endophytic fungus Serendipita indica affects auxin distribution in Arabidopsis thaliana roots through alteration of auxin transport and conjugation to promote plant growth. Plant Cell Environ, doi: 10.1111/pce.14989. PubMed | DOI

Renou J, Li D, Lu J., Zhang B, Gineau E, Ye Y, Shi J, Voxeur A, Akary E, Marmagne A, Gonneau M, Uyttewaal M, Höfte H, Zhao Y, Vernhettes S (2024). A cellulose synthesis inhibitor affects cellulose synthase complex secretion and cortical microtubule dynamics. Plant Physiol, kiae232. PubMed | DOI

Goelzer A, Rajjou L, Chardon F, Loudet O, Fromion V (2024). Resource allocation modeling for autonomous prediction of plant cell phenotypes. Metab Eng, 83:86-101. PubMed | DOI

Valifard M, Khan A, Berg J, Le Hir R, Pommerrenig B, Neuhaus HE, Keller I (2024). Carbohydrate distribution via SWEET17 is critical for Arabidopsis inflorescence branching under drought. J Exp Bot, erae135. PubMed | DOI

Luo J, Have M, Soulay F, Balliau T, Clément G, Tellier F, Zivy M, Avice JC, Masclaux-Daubresse C (2024). Multi-omics analyses of sid2 mutant reflect the need of isochorismate synthase ICS1 to cope with sulfur limitation in Arabidopsis thaliana. Plant J, doi: 10.1111/tpj.16702. PubMed | DOI

Artins A, Martins MCM, Meyer C, Fernie AR, Caldana C (2024). Sensing and regulation of C and N metabolism - novel features and mechanisms of the TOR and SnRK1 signaling pathways. Plant J, doi: 10.1111/tpj.16684. PubMed | DOI

Lardos M, Marmagne A, Bonadé Bottino N, Caris Q, Béal B, Chardon F, Masclaux-Daubresse C (2024). Discovery of the biostimulant effect of asparagine and glutamine on plant growth in Arabidopsis thaliana. Front Plant Sci, 14:1281495. PubMed | DOI

Svietlova N, Reichelt M, Zhyr L, Majumder A, Scholz SS, Grabe V, Krapp A, Oelmüller R, Mithofer A (2023). The Beneficial Fungus Mortierella hyalina Modulates Amino Acid Homeostasis in Arabidopsis under Nitrogen Starvation. Int J Mol Sci, 24(22):16128. PubMed | DOI

Chowdhury NB, Simons-Senftle M, Decouard B, Quilleré I, Rigault M, Sajeevan KA, Acharya B, Chowdhury R, Hirel B, Dellagi A, Maranas CD, Saha R (2023). A multi-organ maize metabolic model connects temperature stress with energy production and reducing power generation. iScience, 26(12):108400. PubMed | DOI

Scholz SS, Barth E, Clément G, Marmagne A, Ludwig-Müller J, Sakakibara H, Kiba T, Vicente-Carbajosa J, Pollmann S, Krapp A, Oelmüller R (2023). The Root-Colonizing Endophyte Piriformospora indica Supports Nitrogen-Starved Arabidopsis thaliana Seedlings with Nitrogen Metabolites. Int J Mol Sci, 24(20):15372. PubMed | DOI

Terce Laforgue T, Lothier J, Limami AM, Rouster J, Lea PJ, Hirel B (2023). The Key Role of Glutamate Dehydrogenase 2 (GDH2) in the Control of Kernel Production in Maize (Zea mays L.). Plants, 12(14):2612. PubMed | DOI

Voronezhskaya V, Volkova PY, Bitarishvili SV, Shesterikova E, Podlutskii M, Clément G, Meyer C, Turqueto Duarte G, Kudin M, Garbaruk D, Turchin L, Kazakova EA (2023). Multi-Omics Analysis of Vicia cracca Responses to Chronic Radiation Exposure in the Chernobyl Exclusion Zone. Plants, 12(12):2318. PubMed | DOI

Demirjian C, Razavi N, Yu G, Mayjonade B, Zhang L, Lonjon F, Chardon F, Carrere S, Gouzy J, Genin S, Macho AP, Roux F, Berthomé R, Vailleau F (2023). An atypical NLR gene confers bacterial wilt susceptibility in Arabidopsis. Plant Commun, 100607. PubMed | DOI

Cheng YH, Durand M, Bréhaut V, Hsu FC, Kelemen Z, Texier Y, Krapp A, Tsay YF (2023). Interplay Between NIN-LIKE PROTEINs 6 and 7 in Nitrate Signaling. Plant Physiol, kiad242. PubMed | DOI

Ingargiola C, Jéhanno I, Forzani C, Marmagne A, Broutin J, Clément G, Leprince AS, Meyer C (2023). The Arabidopsis Target of Rapamycin (TOR) kinase regulates ammonium assimilation and glutamine metabolism. Plant Physiol, kiad216. PubMed | DOI

Limami AM, Cukier C, Hirel B (2023). 15N-labelling of Leaves Combined with GC-MS Analysis as a Tool for Monitoring the Dynamics of Nitrogen Incorporation into Amino Acids. Methods Mol Biol, 2642:151-161. PubMed | DOI

Soulhat C, Wehbi H, Fierlej Y, Berquin P, Girin T, Hilson P, Bouchabké-Coussa O (2023). Fast-track transformation and genome editing in Brachypodium distachyon. Plant Methods, 19(1):31. PubMed | DOI

Main O, Jacquemot MP, Griveau Y, Guillaume S, Demonceaux C, Lopez-Marnet PL, Rey S, Fargier S, Sartre P, Montagnier C, Uijttewaal A, Mangel N, Meunier F, Reymond M, Méchin V, Coursol S (2023). Precise control of water stress in the field reveals different response thresholds for forage yield and digestibility of maize hybrids. Front Plant Sci, 14:1142462. PubMed | DOI

Durand M, Bréhaut V, Clément G, Kelemen Z, Macé J, Feil R, Duville G, Launay-Avon A, Paysant-Le Roux C, Lunn JE, Roudier F, Krapp A (2023). The Arabidopsis transcription factor NLP2 regulates early nitrate responses and integrates nitrate assimilation with energy and carbon skeleton supply. Plant Cell, koad025. PubMed | DOI

PlantACT [...], Chardon F, Krapp A (2023). PlantACT! - how to tackle the climate crisis. Trends Plant Sci, S1360-1385(23)00024-9. PubMed | DOI

Mazoyon C, Hirel B, Pecourt A, Catterou M, Gutierrez L, Sarazin A, Dubois F, Duclercq J (2023). Sphingomonas sediminicola Is an Endosymbiotic Bacterium Able to Induce the Formation of Root Nodules in Pea (Pisum sativum L.) and to Enhance Plant Biomass Production. Microorganisms, 11(1):199. PubMed | DOI

Kunkowska AB, Fontana F, Betti F, Soeur R, Beckers GJM, Meyer C, De Jaeger G, Weits DA, Loreti E, Perata P (2023). Target of rapamycin signaling couples energy to oxygen sensing to modulate hypoxic gene expression in Arabidopsis. Proc Natl Acad Sci,120(3):e2212474120. PubMed | DOI

Dourmap C, Marmagne A, Lebreton S, Clément G, Guivarc'h A, Savoure A, Masclaux-Daubresse C (2022). Carbon and nitrogen remobilization during seed filling is strongly impaired in pyrroline-5-carboxylate dehydrogenase mutant. J Exp Bot, erac499. PubMed | DOI

Limami A, Hirel B, Lothier J (2022). Does Potassium (K+) Contribute to High-Nitrate (NO3-) Weakening of a Plant's Defense System against Necrotrophic Fungi?. Int J Mol Sci, 23(24):15631. PubMed | DOI

Burgess AJ, Masclaux-Daubresse C, Strittmatter G, Weber APM, Taylor SH, Harbinson J, Yin X, Long S, Paul MJ, Westhoff P, Loreto F, Ceriotti A, Saltenis VLR, Pribil M, Nacry P, Scharff LB, Jensen PE, Muller B, Cohan JP, Foulkes J, Rogowsky PM, Debaeke P, Meyer C, Nelissen H, Inzé D, Lankhorst RK, Parry MAJ, Murchie EH, Baekelandt A (2022). Improving crop yield potential: Underlying biological processes and future prospects. Food Energy Secur, 12(1):e435. PubMed | DOI

Hoffmann B, Aubry E, Marmagne A, Dinant S, Chardon F, Le Hir R (2022). Impairment of sugar transport in the vascular system acts on nitrogen remobilisation and nitrogen use efficiency in Arabidopsis. Physiol Plant, e13830. PubMed | DOI