Publications

Van Acker R, Déjardin A, Desmet S, Hoengenaert L, Vanholme R, Morreel K, Laurans F, Kim H, Santoro N, Foster C, Goeminne G, Legée F, Lapierre C, Pilate G, Ralph J, Boerjan W (2017). Different Routes for Conifer- and Sinapaldehyde and Higher Saccharification upon Deficiency in the Dehydrogenase CAD1. Plant Physiol, 175:1018-1039. PubMed | DOI

Van Der Does D, Boutrot F, Engelsdorf T, Rhodes J, Mckenna JF, Vernhettes S, Koevoets I, Tintor N, Veerabagu M, Miedes E, Segonzac C, Roux M, Breda AS, Hardtke CS, Molina A, Rep M, Testerink C, Mouille G, Höfte H, Hamann T, Zipfel C (2017). The Arabidopsis leucine-rich repeat receptor kinase MIK2/LRR-KISS connects cell wall integrity sensing, root growth and response to abiotic and biotic stresses. PLoS Genet, 13:e1006832. PubMed | DOI

Van Gijsegem F, Pedron J, Patrit O, Simond-Cote E, Maia-Grondard A, Petriacq P, Gonzalez R, Blottiere L, Kraepiel Y (2017). Manipulation of ABA Content in Arabidopsis thaliana Modifies Sensitivity and Oxidative Stress Response to Dickeya dadantii and Influences Peroxidase Activity. Front Plant Sci, 8:456. PubMed | DOI

Verdin E, Wipf-Scheibel C, Gognalons P, Aller F, Jacquemond M, Tepfer M (2017). Sequencing viral siRNAs to identify previously undescribed viruses and viroids in a panel of ornamental plant samples structured as a matrix of pools. Virus Res, 241:19-28. PubMed | DOI

Verzeaux J, Hirel B, Dubois F, Lea PJ, Tétu T (2017). Agricultural practices to improve nitrogen use efficiency through the use of arbuscular mycorrhizae: Basic and agronomic aspects. Plant Sci, 264:48-56. PubMed | DOI

Verzeaux J, Nivelle E, Roger D, Hirel B, Dubois F, Tétu T (2017). Spore Density of Arbuscular Mycorrhizal Fungi is Fostered by Six Years of a No-Till System and is Correlated with Environmental Parameters in a Silty Loam Soil. Agronomy, 7:38. PubMed | DOI

Villegente M, Marmey P, Job C, Galland M, Cueff G, Godin B, Rajjou L, Balliau T, Zivy M, Fogliani B, Sarramegna-Burtet V, Job D (2017). A Combination of Histological, Physiological, and Proteomic Approaches Shed Light on Seed Desiccation Tolerance of the Basal Angiosperm Amborella trichopoda. Proteomes, 5:19. PubMed | DOI

Voxeur A, Soubigou-Taconnat L, Legée F, Sakai K, Antelme S, Durand-Tardif M, Lapierre C, Sibout R (2017). Altered lignification in mur1-1 a mutant deficient in GDP-L-fucose synthesis with reduced RG-II cross linking. PLoS One, 12:e0184820. PubMed | DOI

Wang C, Aube F, Planchard N, Quadrado M, Dargel-Graffin C, Nogué F, Mireau H (2017). The pentatricopeptide repeat protein MTSF2 stabilizes a nad1 precursor transcript and defines the 3 end of its 5-half intron. Nucleic Acids Res, 45:6119-6134. PubMed | DOI

Woerlen N, Allam G, Popescu A, Corrigan L, Pautot V, Hepworth SR (2017). Repression of BLADE-ON-PETIOLE genes by KNOX homeodomain protein BREVIPEDICELLUS is essential for differentiation of secondary xylem in Arabidopsis root. Planta, 245:1079-1090. PubMed | DOI

Wu YY, Hou BH, Lee WC, Lu SH, Yang CJ, Vaucheret H, Chen HM (2017). DCL2- and RDR6-dependent transitive silencing of SMXL4 and SMXL5 in Arabidopsis dcl4 mutants causes defective phloem transport and carbohydrate over-accumulation. Plant J, 90:1064-1078. PubMed | DOI

Xu W, Bobet S, Le Gourrierec J, Grain D, De Vos D, Berger A, Salsac F, Kelemen Z, Boucherez J, Rolland A, Mouille G, Routaboul JM, Lepiniec L, Dubos C (2017). TRANSPARENT TESTA 16 and 15 act through different mechanisms to control proanthocyanidin accumulation in Arabidopsis testa. J Exp Bot, 68:2859-2870. PubMed | DOI

Xu Y, Séchet J, Wu Y, Fu Y, Zhu L, Li J, Zhang Y, Gineau E, Gaertner C, Zhou J, Fan X, Liu Y, Zhou L, Mouille G, Lin X (2017). Rice Sucrose Partitioning Mediated by a Putative Pectin Methyltransferase and Homogalacturonan Methylesterification. Plant Physiol, 174:1595-1608. PubMed | DOI

Zarattini M, Launay A, Farjad M, Wenes E, Taconnat L, Boutet S, Bernacchia G, Fagard M (2017). The bile acid deoxycholate elicits defences in Arabidopsis and reduces bacterial infection. Mol Plant Pathol, 18:540-554. PubMed | DOI

Zhang M, Lapierre C, Nouxman NL, Nieuwoudt MK, Smith BG, Chavan RR, Mcardle BH, Harris PJ (2017). Location and characterization of lignin in tracheid cell walls of radiata pine (Pinus radiata D. Don) compression woods. Plant Physiol Biochem, 118:187-198. PubMed | DOI

Selka F, Blein T, Burguet J, Biot E, Laufs P, Andrey P (2017). Towards a spatio-temporal atlas of 3D cellular parameters during leaf morphogenesis. In Proceedings of the IEEE International Conference on Computer Vision (ICCV), pp. 56-63, Venice, Italy. DOI

Avila-Ospina L, Marmagne A, Soulay F, Masclaux-Daubresse C (2016). Identification of Barley (Hordeum vulgare L.) Autophagy Genes and Their Expression Levels during Leaf Senescence, Chronic Nitrogen Limitation and in Response to Dark Exposure. Agronomy, 6:15. PubMed | DOI

Baker LA, Horbury MD, Greenough SE, Allais F, Walsh PS, Habershon S, Stavros VG (2016). Ultrafast Photoprotecting Sunscreens in Natural Plants. J Phys Chem Lett, 7:56-61. PubMed | DOI

Bar M, Israeli A, Levy M, Ben Gera H, Jiménez-Gómez JM, Kouril S, Tarkowski P, Ori N (2016). CLAUSA Is a MYB Transcription Factor That Promotes Leaf Differentiation by Attenuating Cytokinin Signaling. Plant Cell, 28:1602-1615. PubMed | DOI

Bastien R, Legland D, Martin M, Fregosi L, Peaucelle A, Douady S, Moulia B, Höfte H (2016). KymoRod: a method for automated kinematic analysis of rod-shaped plant organs. Plant J, 88:468-475. PubMed | DOI

Baud S, Kelemen Z, Thévenin J, Boulard C, Blanchet S, To A, Payre M, Berger N, Effroy-Cuzzi D, Franco-Zorrilla JM, Godoy M, Solano R, Thevenon E, Parcy F, Lepiniec L, Dubreucq B (2016). Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed. Plant Physiol, 171:1099-1112. PubMed | DOI

Belcram K, Palauqui JC, Pastuglia M (2016). Studying Cell Division Plane Positioning in Early-Stage Embryos 2016. Methods Mol Biol, 1370:183-195. PubMed | DOI

Biot E, Cortizo M, Burguet J, Kiss A, Oughou M, Maugarny-Calès A, Goncalves B, Adroher B, Andrey P, Boudaoud A, Laufs P (2016). Multiscale quantification of morphodynamics: MorphoLeaf software for 2D shape analysis. Development, 143:3417-3428. PubMed | DOI

Biot E, Crowell E, Burguet J, Höfte H, Vernhettes S, Andrey P (2016). Strategy and software for the statistical spatial analysis of 3D intracellular distributions. Plant J, 87:230-242. PubMed | DOI

Boccaccini A, Lorrai R, Ruta V, Frey A, Boutet S, Marion-Poll A, Tarkowska D, Strnad M, Costantino P, Vittorioso P (2016). The DAG1 transcription factor negatively regulates the seed-to-seedling transition in Arabidopsis acting on ABA and GA levels. BMC Plant Biol, 16:198. PubMed | DOI

Broussard O, Petit M, Elie N, Baumberger S, Arnaud A, Ducrot PH, Allais F (2016). Monitoring of free phenol content in lignosulfonates by ClO2 titration and UV difference spectroscopy. Holzforschung, 70:719-724. PubMed | DOI

Bure C, Cacas JL, Badoc A, Mongrand S, Schmitter JM (2016). Branched glycosylated inositolphosphosphingolipid structures in plants revealed by MS(3) analysis. J Mass Spectrom, 51:305-308. PubMed | DOI

Choi K, Reinhard C, Serra H, Ziolkowski PA, Underwood CJ, Zhao X, Hardcastle TJ, Yelina NE, Griffin C, Jackson M, Mézard C, Mcvean G, Copenhaver GP, Henderson IR (2016). Recombination Rate Heterogeneity within Arabidopsis Disease Resistance Genes. PLoS Genet, 12:e1006179. PubMed | DOI

Cifuentes M, Jolivet S, Cromer L, Harashima H, Bulankova P, Renne C, Crismani W, Nomura Y, Nakagami H, Sugimoto K, Schnittger A, Riha K, Mercier R (2016). TDM1 Regulation Determines the Number of Meiotic Divisions. PLoS Genet, 12:e1005856. PubMed | DOI

Cormier F, Foulkes J, Hirel B, Gouache D, Moënne-Loccoz Y, Le Gouis J, Ordon F (2016). Breeding for increased nitrogen-use efficiency: a review for wheat (T. aestivumL.). Plant Breeding, 135:255-278. PubMed | DOI

D'Andrea S (2016). Lipid droplet mobilization: The different ways to loosen the purse strings. Biochimie, 120:17-27. PubMed | DOI

David LC, Berquin P, Kanno Y, Seo M, Daniel-Vedele F., Ferrario-Méry S (2016). N availability modulates the role of NPF3.1, a gibberellin transporter, in GA-mediated phenotypes in Arabidopsis. Planta, 244:1315-1328. PubMed | DOI

De Bigault Du Granrut A, Cacas JL (2016). How Very-Long-Chain Fatty Acids Could Signal Stressful Conditions in Plants?. Front Plant Sci, 7:1490. PubMed | DOI

De Marco F, Pagliari L, Degola F, Buxa SV, Loschi A, Dinant S, Le Hir R, Morin H, Santi S, Musetti R (2016). Combined microscopy and molecular analyses show phloem occlusions and cell wall modifications in tomato leaves in response to 'Candidatus Phytoplasma solani'. J Microsc, 263:212-225. PubMed | DOI

De Saint Germain A, Clavé G, Badet-Denisot MA, Pillot JP, Cornu D, Le Caer JP, Burger M, Pelissier F, Retailleau P, Turnbull C, Bonhomme S, Chory J, Rameau C, Boyer FD (2016). An histidine covalent receptor and butenolide complex mediates strigolactone perception. Nat Chem Biol, 12:787-794. PubMed | DOI

Dekkers BJ, He H, Hanson J, Willems LA, Jamar DC, Cueff G, Rajjou L, Hilhorst HW, Bentsink L (2016). The Arabidopsis DELAY OF GERMINATION 1 gene affects ABSCISIC ACID INSENSITIVE 5 (ABI5) expression and genetically interacts with ABI3 during Arabidopsis seed development. Plant J, 85:451-465. PubMed | DOI

Desbiez C, Verdin E, Tepfer M, Wipf-Scheibel C, Millot P, Dafalla G, Lecoq H (2016). Characterization of a new cucurbit-infecting ipomovirus from Sudan. Arch Virol, 161:2913-2915. PubMed | DOI

Dobrenel T, Caldana C, Hanson J, Robaglia C, Vincentz M, Veit B, Meyer C (2016). TOR Signaling and Nutrient Sensing. Annu Rev Plant Biol, 67:261-285. PubMed | DOI

Dobrenel T, Mancera-Martinez E, Forzani C, Azzopardi M, Davanture M, Moreau M, Schepetilnikov M, Chicher J, Langella O, Zivy M, Robaglia C, Ryabova LA, Hanson J, Meyer C (2016). The Arabidopsis TOR Kinase Specifically Regulates the Expression of Nuclear Genes Coding for Plastidic Ribosomal Proteins and the Phosphorylation of the Cytosolic Ribosomal Protein S6. Front Plant Sci, 7:1611. PubMed | DOI

Dujon B, Pelletier G (2016). Foreword. C R Biol, 339:223-224. PubMed | DOI

Elvira-Matelot E, Bardou F, Ariel F, Jauvion V, Bouteiller N, Le Masson I, Cao J, Crespi MD, Vaucheret H (2016). The Nuclear Ribonucleoprotein SmD1 Interplays with Splicing, RNA Quality Control, and Posttranscriptional Gene Silencing in Arabidopsis. Plant Cell, 28:426-438. PubMed | DOI

Elvira-Matelot E, Hachet M, Shamandi N, Comella P, Saez-Vasquez J, Zytnicki M, Vaucheret H (2016). Arabidopsis RNASE THREE LIKE2 Modulates the Expression of Protein-Coding Genes via 24-Nucleotide Small Interfering RNA-Directed DNA Methylation. Plant Cell, 28:406-425. PubMed | DOI

Fatihi A, Boulard C, Bouyer D, Baud S, Dubreucq B, Lepiniec L (2016). Deciphering and modifying LAFL transcriptional regulatory network in seed for improving yield and quality of storage compounds. Plant Sci, 250:198-204. PubMed | DOI

Faure JD, Tepfer M (2016). Camelina, a Swiss knife for plant lipid biotechnology. Ocl, 23:D503. PubMed | DOI

Feilke K, Streb P, Cornic G, Perreau F, Kruk J, Krieger-Liszkay A (2016). Effect of Chlamydomonas plastid terminal oxidase 1 expressed in tobacco on photosynthetic electron transfer. Plant J, 85:219-228. PubMed | DOI

Fendrych M, Leung J, Friml J (2016). TIR1/AFB-Aux/IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls. Elife, 5:e19048. PubMed | DOI

Fiume E, De Klein N, Rhee SY, Magnani E (2016). A Framework for Discovering, Designing, and Testing MicroProteins to Regulate Synthetic Transcriptional Modules. Methods Mol Biol, 1482:175-188. PubMed | DOI

Fiume E, Guyon V, Remoue C, Magnani E, Miquel M, Grain D, Lepiniec L (2016). TWS1, a Novel Small Protein, Regulates Various Aspects of Seed and Plant Development. Plant Physiol, 172:1732-1745. PubMed | DOI

Gaborieau L, Brown GG, Mireau H (2016). The Propensity of Pentatricopeptide Repeat Genes to Evolve into Restorers of Cytoplasmic Male Sterility. Front Plant Sci, 7:1816. PubMed | DOI

Galindo-Gonzalez L, Mhiri C, Grandbastien MA, Deyholos MK (2016). Ty1-copia elements reveal diverse insertion sites linked to polymorphisms among flax (Linum usitatissimum L.) accessions. BMC Genomics, 17:1002. PubMed | DOI