Research teams

Germination Physiology

PHYGERM 21 members

IJPB publications (2006-to date)
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Avezum L, Ollier L, Siguemoto E, Rajjou L, Mestres C (2024). Hydrolysis and diffusion of raffinose oligosaccharides family products in chickpeas, lentils, and beans under different pH and temperature steeping conditions. Food Res Int, 191:114732. PubMed | DOI
Peng S, Rajjou L (2024). Advancing plant biology through deep learning-powered natural language processing. Plant Cell Rep, 43(8):208. PubMed | DOI
Goelzer A, Rajjou L, Chardon F, Loudet O, Fromion V (2024). Resource allocation modeling for autonomous prediction of plant cell phenotypes. Metab Eng, 83:86-101. PubMed | DOI
Ducloy A, Azzopardi M, Ivsic C, Cueff G, Sourdeval D, Charif D, Cacas JL (2024). A transcriptomic dataset for investigating the Arabidopsis Unfolded Protein Response under chronic, proteotoxic endoplasmic reticulum stress. Data Brief, 53:110243. PubMed | DOI
Barreda L, Brosse C, Boutet S, Perreau F, Rajjou L, Lepiniec L, Corso M (2024). Specialized metabolite modifications in Brassicaceae seeds and plants: diversity, functions and related enzymes. Nat Prod Rep, doi: 10.1039/d3np00043e. PubMed | DOI
Aoi Y, Benamar A, Saulnier L, Ralet MC, North HM (2023). Biochemical data documenting variations in mucilage polysaccharides in a range of glycosyltransferase mutants. Sci Data, 10(1):702. PubMed | DOI
Baud S, Corso M, Debeaujon I, Dubreucq B, Job D, Marion-Poll A, Miquel M, North HM, Rajjou L, Lepiniec L (2023). Recent progress in molecular genetics and omics-driven research in seed biology. C R Biol, 345(4):61-110. PubMed | DOI
Nagel M, Arc E., Rajjou L, Cueff G, Bailly M, Clément G, Sanchez-Vicente I, Bailly C, Seal CE, Roach T, Rolletschek H, Lorenzo O, Borner A, Kranner I (2022). Impacts of drought and elevated temperature on the seeds of malting barley. Front Plant Sci, 13:1049323. PubMed | DOI
Matar N, Macadré C, Ammar GAG, Peres A, Collet B, El Boustany N, Rajjou L, As-Sadi F, Dufresne M, Ratet P (2022). Identification of beneficial Lebanese Trichoderma spp. wheat endophytes. Front Plant Sci, 13:1017890. PubMed | DOI
Perrot-Dockès M., Lévy-Leduc C, Rajjou L (2022). Estimation of Large Block Structured Covariance Matrices: Application to ‘Multi-Omic’ Approaches to Study Seed Quality. J R Stat Soc Series C, 71:119–147. DOI
Cueff G, Rajjou L, Hoang HH, Bailly C, Corbineau F, Leymarie J (2022). In-Depth Proteomic Analysis of the Secondary Dormancy Induction by Hypoxia or High Temperature in Barley Grains. Plant Cell Physiol, pcac021. PubMed | DOI
Sano N, Lounifi I, Cueff G, Collet B, Clément G, Balzergue S, Huguet S, Valot B, Galland M, Rajjou L (2022). Multi-Omics Approaches Unravel Specific Features of Embryo and Endosperm in Rice Seed Germination. Front Plant Sci, 13:867263. PubMed | DOI
Kumar SPJ, Chintagunta AD, Reddy YM, Rajjou L, Kumar GV, Agarwal DK, Prasad SR, Simal-Gandara J (2021). Implications of reactive oxygen and nitrogen species in seed physiology for sustainable crop productivity under changing climate conditions. Current Plant Biology, 100197. DOI
Berger A, Ralet MC, Akary E, Sallé C, Grandjean O, Debeaujon I, North HM (2021). Sterol Glucosyltransferases Tailor Polysaccharide Accumulation in Arabidopsis Seed Coat Epidermal Cells. Cells, 10(10):2546. PubMed | DOI
Cambert M, Berger A, Sallé C, Esling S, Charif D, Cadoret T, Ralet MC, North HM, Rondeau-Mouro C (2021). Datasets of seed mucilage traits for Arabidopsis thaliana natural accessions with atypical outer mucilage. Sci Data, 8(1):79. PubMed | DOI
Fabrissin I, Sano N, Seo M, North HM (2021). Ageing beautifully: can the benefits of seed priming be separated from a reduced lifespan trade-off?. J Exp Bot, 72(7):2312-2333. PubMed | DOI
Saez-Aguayo S, Parra-Rojas JP, Sepúlveda-Orellana P, Celiz-Balboa J, Arenas-Morales V, Sallé C, Salinas-Grenet H, Largo-Gosens A, North HM, Ralet MC, Orellana A (2021). Transport of UDP-rhamnose by URGT2, URGT4, and URGT6 modulates rhamnogalacturonan-I length. Plant Physiol, 185(3):914-933. PubMed | DOI
Sano N, Marion-Poll A (2021). ABA Metabolism and Homeostasis in Seed Dormancy and Germination. Int J Mol Sci, 22(10):5069. PubMed | DOI
Vergès V, Dutilleul C, Godin B, Collet B, Lécureuil A, Rajjou L, Guimaraes C, Pinault M, Chevalier S, Giglioli-Guivarc'h N, Ducos E (2021). Protein Farnesylation Takes Part in Arabidopsis Seed Development. Front Plant Sci, 12:620325. PubMed | DOI
Parry G, Provart NJ, Brady SM, Uzilday B, [...], Rajjou L, Lepiniec L, Multinational Arabidopsis Steering Committee (2020). White Paper: Current status of the multinational Arabidopsis community. Plant Direct, 4(7):e00248. PubMed | DOI
Chardon F, Cueff G, Delannoy E, Aube F, Lornac A, Bedu M, Gilard F, Pateyron S, Rogniaux H, Gargaros A, Mireau H, Rajjou L, Martin-Magniette ML, Budar F (2020). The Consequences of a Disruption in Cyto-Nuclear Coadaptation on the Molecular Response to a Nitrate Starvation in Arabidopsis. Plants, 9:. PubMed | DOI
Perreau F, Frey A, Effroy-Cuzzi D, Savane P, Berger A, Gissot L, Marion-Poll A (2020). ABSCISIC ACID-DEFICIENT4 Has an Essential Function in Both cis-Violaxanthin and cis-Neoxanthin Synthesis. Plant Physiol, 184(3):1303-1316. PubMed | DOI
Sano N, Rajjou L, North HM (2020). Lost in Translation: Physiological Roles of Stored mRNAs in Seed Germination. Plants, 9:. PubMed | DOI
Verly C, Djoman ACR, Rigault M, Giraud F, Rajjou L, Saint-Macary ME, Dellagi A (2020). Plant Defense Stimulator Mediated Defense Activation Is Affected by Nitrate Fertilization and Developmental Stage in Arabidopsis thaliana. Front Plant Sci, 11:583. PubMed | DOI
Williams MaK, Cornuault V, Irani AH, Symonds VV, Malmstrom J, An Y, Sims IM, Carnachan SM, Sallé C, North HM (2020). Polysaccharide Structures in the Outer Mucilage of Arabidopsis Seeds Visualized by AFM. Biomacromolecules, 21:1450-1459. PubMed | DOI
Boussardon C, Martin-Magniette ML, Godin B, Benamar A, Vittrant B, Citerne S, Mary-Huard T, Macherel D, Rajjou L, Budar F (2019). Novel Cytonuclear Combinations Modify Arabidopsis thaliana Seed Physiology and Vigor. Front Plant Sci, 10:32. PubMed | DOI
Chauffour F, Bailly M, Perreau F, Cueff G, Suzuki H, Collet B, Frey A, Clément G, Soubigou-Taconnat L, Balliau T, Krieger-Liszkay A, Rajjou L, Marion-Poll A (2019). Multi-omics Analysis Reveals Sequential Roles for ABA during Seed Maturation. Plant Physiol, 180:1198-1218. PubMed | DOI
Durand TC, Cueff G, Godin B, Valot B, Clément G, Gaude T, Rajjou L (2019). Combined Proteomic and Metabolomic Profiling of the Arabidopsis thaliana vps29 Mutant Reveals Pleiotropic Functions of the Retromer in Seed Development. Int J Mol Sci, 20:362. PubMed | DOI
Fabrissin I, Cueff G, Berger A, Granier F, Sallé C, Poulain D, Ralet MC, North HM (2019). Natural Variation Reveals a Key Role for Rhamnogalacturonan I in Seed Outer Mucilage and Underlying Genes. Plant Physiol, 181:1498-1518. PubMed | DOI
Have M, Luo J, Tellier F, Balliau T, Cueff G, Chardon F, Zivy M, Rajjou L, Cacas JL, Masclaux-Daubresse C (2019). Proteomic and lipidomic analyses of the Arabidopsis atg5 autophagy mutant reveal major changes in endoplasmic reticulum and peroxisome metabolisms and in lipid composition. New Phytol, 223:1461-1477. PubMed | DOI
Liu B, Honnorat B, Yang H, Arancibia J, Rajjou L, Rousseau A (2019). Non-thermal DBD plasma array on seed germination of different plant species. J Phys D: Appl Phys, 52:025401. DOI
Nagel M, Alqudah AM, Bailly M, Rajjou L, Pistrick S, Matzig G, Borner A, Kranner I (2019). Novel loci and a role for nitric oxide for seed dormancy and preharvest sprouting in barley. Plant Cell Environ, 42:1318-1327. PubMed | DOI
Poulain D, Botran L, North HM, Ralet MC (2019). Composition and physicochemical properties of outer mucilage from seeds of Arabidopsis natural accessions. AoB Plants, 11:plz031. PubMed | DOI
Sano N, Takebayashi Y, To A, Mhiri C, Rajjou L, Nakagami H, Kanekatsu M (2019). Shotgun proteomic analysis highlights roles of long-lived mRNAs and de novo transcribed mRNAs upon imbibition in rice embryos. Plant Cell Physiol, . PubMed | DOI
Yazdanpanah F, Maurino VG, Mettler-Altmann T, Buijs G, Bailly MN, Karimi Jashni M, Willems L, Sergeeva LI, Rajjou LC, Hilhorst HWM, Bentsink LN (2019). NADP-MALIC ENZYME 1 Affects Germination after Seed Storage in Arabidopsis thaliana. Plant Cell Physiol, 60:318-328. PubMed | DOI
Francoz E, Lepiniec L, North HM (2018). Seed coats as an alternative molecular factory: thinking outside the box. Plant Reprod, 31:327-342. PubMed | DOI
Have M, Balliau T, Cottyn B, Derond E, Cueff G, Soulay F, Lornac A, Reichman P, Dissmeyer N, Avice JC, Gallois P, Rajjou L, Zivy M, Masclaux-Daubresse C (2018). Increases in activity of proteasome and papain-like cysteine protease in Arabidopsis autophagy mutants: back-up compensatory effect or cell-death promoting effect?. J Exp Bot, 69:1369-1385. PubMed | DOI
Ingram G, North HM, Lepiniec L (2018). Seeds as perfect factories for developing sustainable agriculture. Plant Reprod, 31:201-202. PubMed | DOI
Séchet J, Marion-Poll A, North HM (2018). Emerging Functions for Cell Wall Polysaccharides Accumulated during Eudicot Seed Development. Plants, 7:. PubMed | DOI
Xia Q, Ponnaiah M, Cueff G, Rajjou L, Prodhomme D, Gibon Y, Bailly C, Corbineau F, Meimoun P, El-Maarouf-Bouteau H (2018). Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination. Plant Sci, 269:118-125. PubMed | DOI
Chedraoui S, Abi-Rizk A, El Beyrouthy M, Chalak L, Ouaini N, Rajjou L (2017). Capparis spinosa L. in A Systematic Review: A Xerophilous Species of Multi Values and Promising Potentialities for Agrosystems under the Threat of Global Warming. Front Plant Sci, 8:1845. PubMed | DOI
Galland M, He D, Lounifi I, Arc E, Clément G, Balzergue S, Huguet S, Cueff G, Godin B, Collet B, Granier F, Morin H, Tran J, Valot B, Rajjou L (2017). An Integrated "Multi-Omics" Comparison of Embryo and Endosperm Tissue-Specific Features and Their Impact on Rice Seed Quality. Front Plant Sci, 8:1984. PubMed | DOI
Griffiths JS, North HM (2017). Sticking to cellulose: exploiting Arabidopsis seed coat mucilage to understand cellulose biosynthesis and cell wall polysaccharide interactions. New Phytol, 214:959-966. PubMed | DOI
Larson ER, Van Zelm E, Roux C, Marion-Poll A, Blatt MR (2017). Clathrin Heavy Chain Subunits Coordinate Endo- and Exocytic Traffic and Affect Stomatal Movement. Plant Physiol, 175:708-720. PubMed | DOI
Leung J (2017). The First Broad-Spectrum Abscisic Acid Antagonist. Plant Physiol, 173:1939. PubMed | DOI
Villegente M, Marmey P, Job C, Galland M, Cueff G, Godin B, Rajjou L, Balliau T, Zivy M, Fogliani B, Sarramegna-Burtet V, Job D (2017). A Combination of Histological, Physiological, and Proteomic Approaches Shed Light on Seed Desiccation Tolerance of the Basal Angiosperm Amborella trichopoda. Proteomes, 5:19. PubMed | DOI
Boccaccini A, Lorrai R, Ruta V, Frey A, Boutet S, Marion-Poll A, Tarkowska D, Strnad M, Costantino P, Vittorioso P (2016). The DAG1 transcription factor negatively regulates the seed-to-seedling transition in Arabidopsis acting on ABA and GA levels. BMC Plant Biol, 16:198. PubMed | DOI
Dekkers BJ, He H, Hanson J, Willems LA, Jamar DC, Cueff G, Rajjou L, Hilhorst HW, Bentsink L (2016). The Arabidopsis DELAY OF GERMINATION 1 gene affects ABSCISIC ACID INSENSITIVE 5 (ABI5) expression and genetically interacts with ABI3 during Arabidopsis seed development. Plant J, 85:451-465. PubMed | DOI
Fendrych M, Leung J, Friml J (2016). TIR1/AFB-Aux/IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls. Elife, 5:e19048. PubMed | DOI
Griffiths JS, Crepeau MJ, Ralet MC, Seifert GJ, North HM (2016). Dissecting Seed Mucilage Adherence Mediated by FEI2 and SOS5. Front Plant Sci, 7:1073. PubMed | DOI
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