Biologie des Génomes

Duroc Y, Lemhemdi A, Larcheveque C, Hurel A, Cuacos M, Cromer L, Horlow C, Armstrong SJ, Chelysheva L, Mercier R (2014). The kinesin AtPSS1 promotes synapsis and is required for proper crossover distribution in meiosis. PLoS Genet, 10:e1004674. PubMed | DOI

Girard C, Crismani W, Froger N, Mazel J, Lemhemdi A, Horlow C, Mercier R (2014). FANCM-associated proteins MHF1 and MHF2, but not the other Fanconi anemia factors, limit meiotic crossovers. Nucleic Acids Res, 42:9087-9095. PubMed | DOI

Grandont L, Cunado N, Coriton O, Huteau V, Eber F, Chevre AM, Grelon M, Chelysheva L, Jenczewski E (2014). Homoeologous Chromosome Sorting and Progression of Meiotic Recombination in Brassica napus: Ploidy Does Matter!. Plant Cell, 26:1448-1463. PubMed | DOI

Jahns MT, Vezon D, Chambon A, Pereira L, Falque M, Martin OC, Chelysheva L, Grelon M (2014). Crossover localisation is regulated by the neddylation posttranslational regulatory pathway. PLoS Biol, 12:e1001930. PubMed | DOI

Lloyd AH, Ranoux M, Vautrin S, Glover N, Fourment J, Charif D, Choulet F, Lassalle G, Marande W, Tran J, Granier F, Pingault L, Remay A, Marquis C, Belcram H, Chalhoub B, Feuillet C, Berges H, Sourdille P, Jenczewski E (2014). Meiotic gene evolution: can you teach a new dog new tricks?. Mol Biol Evol, 31:1724-1727. PubMed | DOI

Prosperi JM, Jenczewski E, Muller MH, Fourtier S, Sampoux JP, Ronfort J (2014). Alfalfa domestication history, genetic diversity and genetic resources. Legume Perspectives, 13-14:. PubMed | DOI

Suay L, Zhang D, Eber F, Jouy H, Lode M, Huteau V, Coriton O, Szadkowski E, Leflon M, Martin OC, Falque M, Jenczewski E, Paillard S, Chevre AM (2014). Crossover rate between homologous chromosomes and interference are regulated by the addition of specific unpaired chromosomes in Brassica. New Phytol, 201:645-656. PubMed | DOI

Arnal N, Quadrado M, Simon M, Mireau H (2014). A restorer-of-fertility like pentatricopeptide repeat gene directs ribonucleolytic processing within the coding sequence of rps3-rpl16 and orf240a mitochondrial transcripts in Arabidopsis thaliana. Plant J, 78:134-145. PubMed | DOI

Dahan J, Tcherkez G, Macherel D, Benamar A, Belcram K, Quadrado M, Arnal N, Mireau H (2014). Disruption of the CYTOCHROME C OXIDASE DEFICIENT1 gene leads to cytochrome c oxidase depletion and reorchestrated respiratory metabolism in Arabidopsis. Plant Physiol, 166:1788-1802. PubMed | DOI

Dobler R, Rogell B, Budar F, Dowling DK (2014). A meta-analysis of the strength and nature of cytoplasmic genetic effects. J Evol Biol, 27:2021-2034. PubMed | DOI

Planchard N, Point E, Dahmane T, Giusti F, Renault M, Le Bon C, Durand G, Milon A, Guittet E, Zoonens M, Popot JL, Catoire LJ (2014). The use of amphipols for solution NMR studies of membrane proteins: advantages and constraints as compared to other solubilizing media. J Membr Biol, 247:827-842. PubMed | DOI

Qin X, Warguchuk R, Arnal N, Gaborieau L, Mireau H, Brown GG (2014). In vivo functional analysis of a nuclear restorer PPR protein. BMC Plant Biol, 14:313. PubMed | DOI

Anca IA, Fromentin J, Bui QT, Mhiri C, Grandbastien MA, Simon-Plas F (2014). Different tobacco retrotransposons are specifically modulated by the elicitor cryptogein and reactive oxygen species. J Plant Physiol, 171:1533-1540. PubMed | DOI

Azman A, Mhiri C, Grandbastien M, Tam S (2014). Transposable elements and the detection of somaclonal variation in plant tissue culture: A review. Malaysian Applied Biology, 43:1-12. PubMed | DOI

Parisod C, Salmon A, Ainouche M, Grandbastien MA (2014). Detecting epigenetic effects of transposable elements in plants. Methods Mol Biol, 1112:211-217. PubMed | DOI

Bolger A, Scossa F, Bolger ME, Lanz C, Maumus F, Tohge T, Quesneville H, Alseekh S, Sorensen I, Lichtenstein G, Fich EA, Conte M, Keller H, Schneeberger K, Schwacke R, Ofner I, Vrebalov J, Xu Y, Osorio S, Aflitos SA, Schijlen E, Jiménez-Gómez JM, Ryngajllo M, Kimura S, Kumar Ra, Koenig D, Headland LR, Maloof JN, Sinha N, Van Ham RC, Lankhorst RK, Mao L, Vogel A, Arsova B, Panstruga R, Fei Z, Rose JK, Zamir D, Carrari F, Giovannoni JJ, Weigel D, Usadel B, Fernie AR (2014). The genome of the stress-tolerant wild tomato species Solanum pennellii. Nat Genet, 46:1034-1038. PubMed | DOI

Bomblies K, Loudet O (2014). Genome studies and molecular genetics: Genomic approaches to understanding evolution, development and the plant phenome. Curr Opin Plant Biol, 18:v-vi. PubMed | DOI

Coustham V, Vlad D, Deremetz A, Gy I, Cubillos FA, Kerdaffrec E, Loudet O, Bouché N (2014). SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1. PLoS One, 9:e84687. PubMed | DOI

Cubillos FA, Stegle O, Grondin C, Canut M, Tisne S, Gy I, Loudet O (2014). Extensive cis-regulatory variation robust to environmental perturbation in Arabidopsis. Plant Cell, 26:4298-4310. PubMed | DOI

Gloggnitzer J, Akimcheva S, Srinivasan A, Kusenda B, Riehs N, Stampfl H, Bautor J, Dekrout B, Jonak C, Jiménez-Gómez JM, Parker JE, Riha K (2014). Nonsense-mediated mRNA decay modulates immune receptor levels to regulate plant antibacterial defense. Cell Host Microbe, 16:376-390. PubMed | DOI

Jiménez-Gómez JM (2014). Network types and their application in natural variation studies in plants. Curr Opin Plant Biol, 18:80-86. PubMed | DOI

Saez-Aguayo S, Rondeau-Mouro C, Macquet A, Kronholm I, Ralet MC, Berger A, Sallé C, Poulain D, Granier F, Botran L, Loudet O, De Meaux J, Marion-Poll A, North HM (2014). Local evolution of seed flotation in Arabidopsis. PLoS Genet, 10:e1004221. PubMed | DOI

Schmalenbach I, Zhang L, Reymond M, Jiménez-Gómez JM (2014). The relationship between flowering time and growth responses to drought in the Arabidopsis Landsberg erecta x Antwerp-1 population. Front Plant Sci, 5:609. PubMed | DOI

Schmalenbach I, Zhang L, Ryngajllo M, Jiménez-Gómez JM (2014). Functional analysis of the Landsberg erecta allele of FRIGIDA. BMC Plant Biol, 14:218. PubMed | DOI

Téoulé E, Géry C (2014). Mapping of quantitative trait loci (QTL) associated with plant freezing tolerance and cold acclimation 2014. Methods Mol Biol, 1166:43-64. PubMed | DOI

Trontin C, Kiani S, Corwin JA, Hématy K, Yansouni J, Kliebenstein DJ, Loudet O (2014). A pair of receptor-like kinases is responsible for natural variation in shoot growth response to mannitol treatment in Arabidopsis thaliana. Plant J, 78:121-133. PubMed | DOI

Gallois JL, Drouaud J, Lécureuil A, Guyon-Debast A, Bonhomme S, Guerche P (2013). Functional characterization of the plant ubiquitin regulatory X (UBX) domain-containing protein AtPUX7 in Arabidopsis thaliana. Gene, 526:299-308. PubMed | DOI

Podevin N, Davies HV, Hartung F, Nogué F, Casacuberta JM (2013). Site-directed nucleases: a paradigm shift in predictable, knowledge-based plant breeding. Trends Biotechnol, 31:375-383. PubMed | DOI

Bonhomme S, Nogué F, Rameau C, Schaefer DG (2013). Usefulness of Physcomitrella patens for studying plant organogenesis. Methods Mol Biol, 959:21-43. PubMed | DOI

Martinez De Alba AE, Elvira-Matelot E, Vaucheret H (2013). Gene silencing in plants: a diversity of pathways. Biochim Biophys Acta, 1829:1300-1308. PubMed | DOI

Moreno AB, Martinez De Alba AE, Bardou F, Crespi MD, Vaucheret H, Maizel A, Mallory AC (2013). Cytoplasmic and nuclear quality control and turnover of single-stranded RNA modulate post-transcriptional gene silencing in plants. Nucleic Acids Res, 41:4699-4708. PubMed | DOI

Poulsen C, Vaucheret H, Brodersen P (2013). Lessons on RNA silencing mechanisms in plants from eukaryotic argonaute structures. Plant Cell, 25:22-37. PubMed | DOI

Romon M, Soustre-Gacougnolle I, Schmitt C, Perrin M, Burdloff Y, Chevalier E, Mutterer J, Himber C, Zervudacki J, Montavon T, Zimmermann A, Elmayan T, Vaucheret H, Dunoyer P, Masson JE (2013). RNA silencing is resistant to low-temperature in grapevine. PLoS One, 8:e82652. PubMed | DOI

Zhong SH, Liu JZ, Jin H, Lin L, Li Q, Chen Y, Yuan YX, Wang ZY, Huang H, Qi YJ, Chen XY, Vaucheret H, Chory J, Li J, He ZH (2013). Warm temperatures induce transgenerational epigenetic release of RNA silencing by inhibiting siRNA biogenesis in Arabidopsis. Proc Natl Acad Sci U S A, 110:9171-9176. PubMed | DOI

Basu-Roy S, Gauthier F, Giraut L, Mézard C, Falque M, Martin OC (2013). Hot regions of noninterfering crossovers coexist with a nonuniformly interfering pathway in Arabidopsis thaliana. Genetics, 195:769-779. PubMed | DOI

Cifuentes M, Rivard M, Pereira L, Chelysheva L, Mercier R (2013). Haploid meiosis in Arabidopsis: double-strand breaks are formed and repaired but without synapsis and crossovers. PLoS One, 8:e72431. PubMed | DOI

Crismani W, Girard C, Mercier R (2013). Tinkering with meiosis. J Exp Bot, 64:55-65. PubMed | DOI

Crismani W, Portemer V, Froger N, Chelysheva L, Horlow C, Vrielynck N, Mercier R (2013). MCM8 is required for a pathway of meiotic double-strand break repair independent of DMC1 in Arabidopsis thaliana. PLoS Genet, 9:e1003165. PubMed | DOI

Cromer L, Jolivet S, Horlow C, Chelysheva L, Heyman J, De Jaeger G, Koncz C, De Veylder L, Mercier R (2013). Centromeric cohesion is protected twice at meiosis, by SHUGOSHINs at anaphase I and by PATRONUS at interkinesis. Curr Biol, 23:2090-2099. PubMed | DOI

Drouaud J, Khademian H, Giraut L, Zanni V, Bellalou S, Henderson IR, Falque M, Mézard C (2013). Contrasted patterns of crossover and non-crossover at Arabidopsis thaliana meiotic recombination hotspots. PLoS Genet, 9:e1003922. PubMed | DOI

Grandont L, Jenczewski E, Lloyd A (2013). Meiosis and its deviations in polyploid plants. Cytogenet Genome Res, 140:171-184. PubMed | DOI

Haili N, Arnal N, Quadrado M, Amiar S, Tcherkez G, Dahan J, Briozzo P, Colas Des Francs-Small C, Vrielynck N, Mireau H (2013). The pentatricopeptide repeat MTSF1 protein stabilizes the nad4 mRNA in Arabidopsis mitochondria. Nucleic Acids Res, 41:6650-6663. PubMed | DOI

Jenczewski E (2013). Evolution: he who grabs too much loses all. Curr Biol, 23:R961-963. PubMed | DOI

Uanschou C, Ronceret A, Von Harder M, De Muyt A, Vezon D, Pereira L, Chelysheva L, Kobayashi W, Kurumizaka H, Schlögelhofer P, Grelon M (2013). Sufficient amounts of functional HOP2/MND1 complex promote interhomolog DNA repair but are dispensable for intersister DNA repair during meiosis in Arabidopsis. Plant Cell, 25:4924-4940. PubMed | DOI

Dahan J, Mireau H (2013). The Rf and Rf-like PPR in higher plants, a fast-evolving subclass of PPR genes. RNA Biol, 10:1469-1476. PubMed | DOI

Gobron N, Waszczak C, Simon M, Hiard S, Boivin S, Charif D, Ducamp A, Wenes E, Budar F (2013). A cryptic cytoplasmic male sterility unveils a possible gynodioecious past for Arabidopsis thaliana. PLoS One, 8:e62450. PubMed | DOI

Renny-Byfield S, Kovarik A, Kelly LJ, Macas J, Novak P, Chase MW, Nichols RA, Pancholi MR, Grandbastien MA, Leitch AR (2013). Diploidization and genome size change in allopolyploids is associated with differential dynamics of low- and high-copy sequences. Plant J, 74:829-839. PubMed | DOI

Chardon F, Bedu M, Calenge F, Klemens PA, Spinner L, Clément G, Chietera G, Leran S, Ferrand M, Lacombe B, Loudet O, Dinant S, Bellini C, Neuhaus HE, Daniel-Vedele F, Krapp A (2013). Leaf fructose content is controlled by the vacuolar transporter SWEET17 in Arabidopsis. Curr Biol, 23:697-702. PubMed | DOI

Koprivova A, Giovannetti M, Baraniecka P, Lee BR, Grondin C, Loudet O, Kopriva S (2013). Natural variation in the ATPS1 isoform of ATP sulfurylase contributes to the control of sulfate levels in Arabidopsis. Plant Physiol, 163:1133-1141. PubMed | DOI

Silveira AB, Trontin C, Cortijo S, Barau J, Del Bem LE, Loudet O, Colot V, Vincentz M (2013). Extensive natural epigenetic variation at a de novo originated gene. PLoS Genet, 9:e1003437. PubMed | DOI