Développement, Signalisation et Modélisation

Raimondi D, Corso M, Fariselli P, Moreau Y (2022). From genotype to phenotype in Arabidopsis thaliana: in-silico genome interpretation predicts 288 phenotypes from sequencing data. Nucleic Acids Res, 50(3):e16. PubMed | DOI

Rivarola Sena AC, Andres-Robin A, Vialette AC, Just J, Launay-Avon A, Borrega N, Dubreucq B, Scutt CP (2022). Custom methods to identify conserved genetic modules applied to novel transcriptomic data from Amborella trichopoda. J Exp Bot, erac044. PubMed | DOI

Rivière Q, Corso M, Ciortan M, Noël G, Verbruggen N, Defrance M (2022). Exploiting Genomic Features to Improve the Prediction of Transcription Factor Binding Sites in Plants. Plant Cell Physiol, pcac095. PubMed | DOI

Belcram K, Legland D, Pastuglia M (2022). Quantification of Cell Division Angles in the Arabidopsis Root. Methods Mol Biol, 2382:209-221. PubMed | DOI

Belcram K, Palauqui JC, Pastuglia M (2022). Studying Cell Division Plane Positioning in Early-Stage Embryos. Methods Mol Biol, 2382:141-154. PubMed | DOI

Romeiro Motta M, Zhao X, Pastuglia M, Belcram K, Roodbarkelari F, Komaki M, Harashima H, Komaki S, Kumar M, Bulankova P, Heese M, Riha K, Bouchez D, Schnittger A (2022). B1-type cyclins control microtubule organization during cell division in Arabidopsis. EMBO Rep, 23(1):e53995. PubMed | DOI

Gámez-Arjona FM, Vitale S, Voxeur A, Dora S, Müller S, Sancho-Andrés G, Montesinos JC, Di Pietro A, Sánchez-Rodríguez C (2022). Impairment of the cellulose degradation machinery enhances Fusarium oxysporum virulence but limits its reproductive fitness. Sci Adv, 8(16):eabl9734. PubMed | DOI

Kohorn BD, Dexter-Meldrum J, Zorensky FDH, Chabout S, Mouille G, Kohorn S (2021). Pectin Dependent Cell Adhesion Restored by a Mutant Microtubule Organizing Membrane Protein. Plants, 10(4):690. PubMed | DOI

Kohorn BD, Greed BE, Mouille G, Verger S, Kohorn SL (2021). Effects of Arabidopsis wall associated kinase mutations on ESMERALDA1 and elicitor induced ROS. PLoS One, 16(5):e0251922. PubMed | DOI

Kohorn BD, Zorensky FDH, Dexter-Meldrum J, Chabout S, Mouille G, Kohorn S (2021). Mutation of an Arabidopsis Golgi membrane protein ELMO1 reduces cell adhesion. Development, 148(10):dev199420. PubMed | DOI

Velasquez SM, Guo X, Gallemi M, Aryal B, Venhuizen P, Barbez E, Dünser KA, Darino M, Pencík A, Novák O, Kalyna M, Mouille G, Benková E, P Bhalerao R, Mravec J, Kleine-Vehn J (2021). Xyloglucan Remodeling Defines Auxin-Dependent Differential Tissue Expansion in Plants. Int J Mol Sci, 22(17):9222. PubMed | DOI

Arpòn J, Sakai K, Gaudin V, Andrey P (2021). Spatial modeling of biological patterns shows multiscale organization of Arabidopsis thaliana heterochromatin. Sci Rep, 11(1):323. PubMed | DOI

Lu J, Le Hir R, Gómez-Páez DM, Coen O, Péchoux C, Jasinski S, Magnani E (2021). The nucellus: between cell elimination and sugar transport. Plant Physiol, 185(2):478-490. PubMed | DOI

Gomez RE, Lupette J, Chambaud C, Castets J, Ducloy A, Cacas JL, Masclaux-Daubresse C, Bernard A (2021). How Lipids Contribute to Autophagosome Biogenesis, a Critical Process in Plant Responses to Stresses. Cells, 10(6):1272. PubMed | DOI

Sakai K, Citerne S, Antelme S, Le Bris P, Daniel S, Bouder A, D'Orlando A, Cartwright A, Tellier F, Pateyron S, Delannoy E, Laudencia-Chingcuanco D, Mouille G, Palauqui JC, Vogel J, Sibout R (2021). BdERECTA controls vasculature patterning and phloem-xylem organization in Brachypodium distachyon. BMC Plant Biol, 21(1):196. PubMed | DOI

Corso M, An X, Jones CY, Gonzalez-Doblas V, Schvartzman MS, Malkowski E, Willats WGT, Hanikenne M, Verbruggen N (2021). Adaptation of Arabidopsis halleri to extreme metal pollution through limited metal accumulation involves changes in cell wall composition and metal homeostasis. New Phytol, 230(2):669-682. PubMed | DOI

Haas KT, Peaucelle A (2021). From monocots to dicots: the multifold aspect of cell wall expansion. J Exp Bot, 72(5):1511-1513. PubMed | DOI

Haas KT, Peaucelle A (2021). Protocol for multicolor three-dimensional dSTORM data analysis using MATLAB-based script package Grafeo. STAR Protoc, 2(3):100808. PubMed | DOI

Haas KT, Wightman R, Peaucelle A, Höfte H (2021). The role of pectin phase separation in plant cell wall assembly and growth. Cell Surf, 7:100054. PubMed | DOI

Li Z, Sela A, Fridman Y, Garstka L, Höfte H, Savaldi-Goldstein S, Wolf S (2021). Optimal BR signalling is required for adequate cell wall orientation in the Arabidopsis root meristem. Development, 148(21):dev199504. PubMed | DOI

Schumacher I, Ndinyanka Fabrice T, Abdou MT, Kuhn BM, Voxeur A, Herger A, Roffler S, Bigler L, Wicker T, Ringli C (2021). Defects in Cell Wall Differentiation of the Arabidopsis Mutant rol1-2 Is Dependent on Cyclin-Dependent Kinase CDK8. Cells, 10(3):685. PubMed | DOI

Ouni E, Peaucelle A, Haas KT, Van Kerk O, Dolmans MM, Tuuri T, Otala M, Amorim CA (2021). A blueprint of the topology and mechanics of the human ovary for next-generation bioengineering and diagnosis. Nat Commun, 12(1):5603. PubMed | DOI

Fleury V, Peaucelle A, Abourachid A, Plateau O (2021). Second-order division in sectors as a prepattern for sensory organs in vertebrate development. Theory Biosci. PubMed | DOI

Jacob P, Brisou G, Dalmais M, Thévenin J, Van der Wal F, Latrasse D, Suresh Devani R, Benhamed M, Dubreucq B, Boualem A, Lepiniec L, Immink RGH, Hirt H, Bendahmane A (2021). The Seed Development Factors TT2 and MYB5 Regulate Heat Stress Response in Arabidopsis. Genes, 12(5):746. PubMed | DOI

Kazaz S, Miray R, Baud S (2021). Acyl-Acyl Carrier Protein Desaturases and Plant Biotic Interactions. Cells, 10(3):674. PubMed | DOI

Miray R, Kazaz S, To A, Baud S (2021). Molecular Control of Oil Metabolism in the Endosperm of Seeds. Int J Mol Sci, 22(4):1621. PubMed | DOI

Salaün C, Lepiniec L, Dubreucq B (2021). Genetic and Molecular Control of Somatic Embryogenesis. Plants, 10(7):1467. PubMed | DOI

Zarattini M, Corso M, Kadowaki MA, Monclaro A, Magri S, Milanese I, Jolivet S, De Godoy MO, Hermans C, Fagard M, Cannella D (2021). LPMO-oxidized cellulose oligosaccharides evoke immunity in Arabidopsis conferring resistance towards necrotrophic fungus B. cinerea. Commun Biol, 4(1):727. PubMed | DOI

Safran J, Habrylo O, Cherkaoui M, Lecomte S, Voxeur A, Pilard S, Bassard S, Pau-Roblot C, Mercadante D, Pelloux J, Sénéchal F (2021). New insights into the specificity and processivity of two novel pectinases from Verticillium dahliae. Int J Biol Macromol, 176:165-176. PubMed | DOI

Parry G, Provart NJ, Brady SM, Uzilday B, [...], Rajjou L, Lepiniec L, Multinational Arabidopsis Steering Committee (2020). White Paper: Current status of the multinational Arabidopsis community. Plant Direct, 4(7):e00248. PubMed | DOI

Hurny A, Cuesta C, Cavallari N, Ötvös K, Duclercq J, Dokladal L, Montesinos JC, Gallemi M, Semeradova H, Rauter T, Stenzel I, Persiau G, Benade F, Bhalearo R, Sykorova E, Gorzsas A, Séchet J, Mouille G, Heilmann I, De Jaeger G, Ludwig-Müller J, Benková E (2020). SYNERGISTIC ON AUXIN AND CYTOKININ 1 positively regulates growth and attenuates soil pathogen resistance. Nat Commun, 11:2170. PubMed | DOI

Zdanio M, Boron AK, Balcerowicz D, Schoenaers S, Markakis MN, Mouille G, Pintelon I, Suslov D, Gonneau M, Höfte H, Vissenberg K (2020). The Proline-Rich Family Protein EXTENSIN33 Is Required for Etiolated Arabidopsis thaliana Hypocotyl Growth. Plant Cell Physiol, 61:1191-1203. PubMed | DOI

Leung J, Gaudin V (2020). Who Rules the Cell? An Epi-Tale of Histone, DNA, RNA, and the Metabolic Deep State. Front Plant Sci, 11:181. PubMed | DOI

Santos AP, Gaudin V, Mozgova I, Pontvianne F, Schubert D, Tek AL, Dvorackova M, Liu C, Fransz P, Rosa S, Farrona S (2020). Tiding-up the plant nuclear space: domains, function and dynamics. J Exp Bot, . PubMed | DOI

Bruggeman Q, Piron-Prunier F, Tellier F, Faure JD, Latrasse D, Manza-Mianza D, Mazubert C, Citerne S, Boutet S, Lugan R, Bergounioux C, Raynaud C, Benhamed M, Delarue M (2020). Involvement of Arabidopsis BIG protein in cell death mediated by Myo-inositol homeostasis. Sci Rep, 10(1):11268. PubMed | DOI

Hermier D, Lan A, Tellier F, Blais A, Culetto MG, Mathe V, Bellec Y, Gissot L, Schmidely P, Faure JD (2020). Intestinal Availability and Metabolic Effects of Dietary Camelina Sphingolipids during the Metabolic Syndrome Onset in Mice. J Agric Food Chem, 68:788-798. PubMed | DOI

Jamme F, Cinquin B, Gohon Y, Pereiro E, Refregiers M, Froissard M (2020). Synchrotron multimodal imaging in a whole cell reveals lipid droplet core organization. J Synchrotron Radiat, 27:772-778. PubMed | DOI

Kelemen Z, Zhang R, Gissot L, Chouket R, Bellec Y, Croquette V, Jullien L, Faure JD, Le Saux T (2020). Dynamic Contrast for Plant Phenotyping. ACS Omega, 5(25):15105-15114. PubMed | DOI

Masclaux-Daubresse C, D'Andrea S, Bouchez I, Cacas JL (2020). Reserve lipids and plant autophagy. J Exp Bot, 71:2854-2861. PubMed | DOI

Serra L, Perrot-Rechenmann C (2020). Spatiotemporal control of cell growth by CUC3 shapes leaf margins. Development, 147:. PubMed | DOI

Haddad-Tovolli R, Altirriba J, Obri A, Sanchez EE, Chivite I, Mila-Guasch M, Ramirez S, Gomez-Valades AG, Pozo M, Burguet J, Velloso LA, Claret M (2020). Pro-opiomelanocortin (POMC) neuron translatome signatures underlying obesogenic gestational malprogramming in mice. Mol Metab, 36:100963. PubMed | DOI

Burguet J, Andrey P (2020). Edge correction for intensity estimation of 3D heterogeneous point processes from replicated data. Spat Stat, 36:100421. DOI

Alonso-Serra J, Shi X, Peaucelle A, Rastas P, Bourdon M, Immanen J, Takahashi J, Koivula H, Eswaran G, Muranen S, Help H, Smolander OP, Su C, Safronov O, Gerber L, Salojarvi J, Hagqvist R, Mähönen AP, Helariutta Y, Nieminen K (2020). ELIMAKI Locus Is Required for Vertical Proprioceptive Response in Birch Trees. Curr Biol, 30:589-599 e585. PubMed | DOI

Boix E, Gineau E, Narciso JO, Höfte H, Mouille G, Navard P (2020). Influence of chemical treatments of miscanthus stem fragments on polysaccharide release in the presence of cement and on the mechanical properties of bio-based concrete materials. Cement and Concrete Composites, 105:. PubMed | DOI

Eskandari S, Höfte H, Zhang T (2020). Foliar manganese spray induces the resistance of cucumber to Colletotrichum lagenarium. J Plant Physiol, 246-247:153129. PubMed | DOI

Haas KT, Rivière M, Wightman R, Peaucelle A (2020). Multitarget Immunohistochemistry for Confocal and Super-resolution Imaging of Plant Cell Wall Polysaccharides. Bio Protoc, 10(19):e3783. PubMed | DOI

Haas KT, Wightman R, Meyerowitz EM, Peaucelle A (2020). Pectin homogalacturonan nanofilament expansion drives morphogenesis in plant epidermal cells. Science, 367:1003-1007. PubMed | DOI

Holzwart E, Wanke F, Glockner N, Höfte H, Harter K, Wolf S (2020). A Mutant Allele Uncouples the Brassinosteroid-Dependent and Independent Functions of BRASSINOSTEROID INSENSITIVE 1. Plant Physiol, 182:669-678. PubMed | DOI

Peaucelle A, Wightman R, Haas KT (2020). Multicolor 3D-dSTORM Reveals Native-State Ultrastructure of Polysaccharides' Network during Plant Cell Wall Assembly. iScience, 23(12):101862. PubMed | DOI

Rivière M, Corre Y, Peaucelle A, Derr J, Douady S (2020). The hook shape of growing leaves results from an active regulatory process. J Exp Bot, 71(20):6408-6417. PubMed | DOI