Research departments

Biomass, Seeds and Bioproducts

BSB 5 research teams

IJPB publications (2006-to date)
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Ducrot PH, Allais F, Martinet S (2009). Straightforward Total Synthesis of 2-O-Feruloyl-l-malate, 2-O-Sinapoyl-l-malate and 2-O-5-Hydroxyferuloyl-l-malate. Synthesis, 2009:3571-3578. PubMed | DOI
Grienenberger E, Besseau S, Geoffroy P, Debayle D, Heintz D, Lapierre C, Pollet B, Heitz T, Legrand M (2009). A BAHD acyltransferase is expressed in the tapetum of Arabidopsis anthers and is involved in the synthesis of hydroxycinnamoyl spermidines. Plant J, 58:246-259. PubMed | DOI
Matsuno M, Compagnon V, Schoch GA, Schmitt M, Debayle D, Bassard JE, Pollet B, Hehn A, Heintz D, Ullmann P, Lapierre C, Bernier F, Ehlting J, Werck-Reichhart D (2009). Evolution of a novel phenolic pathway for pollen development. Science, 325:1688-1692. PubMed | DOI
Quentin M, Allasia V, Pegard A, Allais F, Ducrot PH, Favery B, Levis C, Martinet S, Masur C, Ponchet M, Roby D, Schlaich NL, Jouanin L, Keller H (2009). Imbalanced lignin biosynthesis promotes the sexual reproduction of homothallic oomycete pathogens. PLoS Pathog, 5:e1000264. PubMed | DOI
Riboulet C, Guillaumie S, Méchin V, Bosio M, Pichon M, Goffner D, Lapierre C, Pollet B, Lefevre B, Martinant JP, Barriere Y (2009). Kinetics of Phenylpropanoid Gene Expression in Maize Growing Internodes: Relationships with Cell Wall Deposition. Crop Science, 49:211-223. PubMed | DOI
Ruel K, Berrio-Sierra J, Derikvand MM, Pollet B, Thévenin J, Lapierre C, Jouanin L, Joseleau JP (2009). Impact of CCR1 silencing on the assembly of lignified secondary walls in Arabidopsis thaliana. New Phytol, 184:99-113. PubMed | DOI
Saidi I, Ammar S, Demont-Caulet N, Thévenin J, Lapierre C, Bouzid S, Jouanin L (2009). Thigmomorphogenesis in Solanum lycopersicum: Morphological and biochemical responses in stem after mechanical stimulation. Plant Science, 177:1-6. PubMed | DOI
Tellier F, Fritz R, Kerhoas L, Ducrot PH, Carlin-Sinclair A, Einhorn J, Leroux P (2009). Metabolism of fungicidal cyanooximes, cymoxanil and analogues in various strains of Botrytis cinerea. Pest Manag Sci, 65:129-136. PubMed | DOI
Baud S, Dichow NR, Kelemen Z, D'Andrea S, To A, Berger N, Canonge M, Kronenberger J, Viterbo D, Dubreucq B, Lepiniec L, Chardot T, Miquel M (2009). Regulation of HSD1 in seeds of Arabidopsis thaliana. Plant Cell Physiol, 50:1463-1478. PubMed | DOI
Beopoulos A, Chardot T, Nicaud JM (2009). Yarrowia lipolytica: A model and a tool to understand the mechanisms implicated in lipid accumulation. Biochimie, 91:692-696. PubMed | DOI
Froissard M, D'Andrea S, Boulard C, Chardot T (2009). Heterologous expression of AtClo1, a plant oil body protein, induces lipid accumulation in yeast. FEMS Yeast Res, 9:428-438. PubMed | DOI
Jolivet P, Boulard C, Bellamy A, Larre C, Barre M, Rogniaux H, D'Andrea S, Chardot T, Nesi N (2009). Protein composition of oil bodies from mature Brassica napus seeds. Proteomics, 9:3268-3284. PubMed | DOI
Tylichova M, Kopecný D, Briozzo P, Moréra S, Snegaroff J, Sebela M (2009). Characterization of aminoaldehyde dehydrogenases from pea and tomato. Amino Acids, 37 Sup1:48-48. PubMed | DOI
Vermachova M, Purkrtova Z, Santrucek J, Jolivet P, Chardot T, Kodicek M (2009). Surface mapping of plant oil-bodies' proteins. FEBS J, 276, Issue s1:170-171. PubMed | DOI
Yeh JI, Kettering R, Saxl R, Bourand A, Darbon E, Joly N, Briozzo P, Deutscher J (2009). Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation. Biochemistry, 48:346-356. PubMed | DOI
Nélieu S, Perreau F, Bonnemoy F, Ollitrault M, Azam D, Lagadic L, Bohatier J, Einhorn J (2009). Sunlight nitrate-induced photodegradation of chlorotoluron: evidence of the process in aquatic mesocosms. Environ Sci Technol, 43:3148-3154. PubMed | DOI
Sugliani M, Rajjou L, Clerkx EJ, Koornneef M, Soppe WJ (2009). Natural modifiers of seed longevity in the Arabidopsis mutants abscisic acid insensitive3-5 (abi3-5) and leafy cotyledon1-3 (lec1-3). New Phytol, 184:898-908. PubMed | DOI
Tadonleke RD, Leberre B, Perreau F, Humbert JF (2009). Responses of lake bacterioplankton activities and composition to the herbicide diuron. Aquat Toxicol, 94:103-113. PubMed | DOI
Tanou G, Job C, Rajjou L, Arc E, Belghazi M, Diamantidis G, Molassiotis A, Job D (2009). Proteomics reveals the overlapping roles of hydrogen peroxide and nitric oxide in the acclimation of citrus plants to salinity. Plant J, 60:795-804. PubMed | DOI
Truernit E, Palauqui JC (2009). Looking deeper: whole-mount confocal imaging of plant tissue for the accurate study of inner tissue layers. Plant Signal Behav, 4:151-152. PubMed | DOI
Baud S, Lepiniec L (2009). Regulation of de novo fatty acid synthesis in maturing oilseeds of Arabidopsis. Plant Physiol Biochem, 47:448-455. PubMed | DOI
Baud S, Wuilleme S, To A, Rochat C, Lepiniec L (2009). Role of WRINKLED1 in the transcriptional regulation of glycolytic and fatty acid biosynthetic genes in Arabidopsis. Plant J, 60:933-947. PubMed | DOI
Lu C, Xin Z, Ren Z, Miquel M, Browse J (2009). An enzyme regulating triacylglycerol composition is encoded by the ROD1 gene of Arabidopsis. Proc Natl Acad Sci U S A, 106:18837-18842. PubMed | DOI
Morse AM, Whetten RW, Dubos C, Campbell MM (2009). Post-translational modification of an R2R3-MYB transcription factor by a MAP Kinase during xylem development. New Phytol, 183:1001-1013. PubMed | DOI
Nesi N, Lucas MO, Auger B, Baron C, Lécureuil A, Guerche P, Kronenberger J, Lepiniec L, Debeaujon I, Renard M (2009). The promoter of the Arabidopsis thaliana BAN gene is active in proanthocyanidin-accumulating cells of the Brassica napus seed coat. Plant Cell Rep, 28:601-617. PubMed | DOI
Punginelli C, Wilson A, Routaboul JM, Kirilovsky D (2009). Influence of zeaxanthin and echinenone binding on the activity of the orange carotenoid protein. Biochim Biophys Acta, 1787:280-288. PubMed | DOI
Betz GA, Knappe C, Lapierre C, Olbrich M, Welzl G, Langebartels C, Heller W, Sandermann H, Ernst D (2008). Ozone affects shikimate pathway transcripts and monomeric lignin composition in European beech (Fagus sylvatica L.). European Journal of Forest Research, 128:109-116. PubMed | DOI
Eglin T, Maunoury-Danger F, Fresneau C, Lelarge C, Pollet B, Lapierre C, Francois C, Damesin C (2008). Biochemical composition is not the main factor influencing variability in carbon isotope composition of tree rings. Tree Physiol, 28:1619-1628. PubMed | DOI
Es-Safi NE, Le Guernevé C, Henri Ducrot P (2008). Application of NMR Spectroscopy and Mass Spectrometry to the Structural Elucidation of Modified Flavan-3-ols and Their Coupling Reaction Products*. Spectroscopy Letters, 41:41-56. PubMed | DOI
Es-Safi NE, Meudec E, Bouchut C, Fulcrand H, Ducrot PH, Herbette G, Cheynier V (2008). New compounds obtained by evolution and oxidation of malvidin 3-O-glucoside in ethanolic medium. J Agric Food Chem, 56:4584-4591. PubMed | DOI
Fardet A, Llorach R, Orsoni A, Martin JF, Pujos-Guillot E, Lapierre C, Scalbert A (2008). Metabolomics provide new insight on the metabolism of dietary phytochemicals in rats. J Nutr, 138:1282-1287. PubMed | DOI
Ghidouche S, Es-Safi NE, Ducrot PH (2008). Mechanistic study on the enzymatic oxidation of flavonols. Tetrahedron Letters, 49:619-623. PubMed | DOI
Mir Derikvand M, Sierra JB, Ruel K, Pollet B, Do CT, Thévenin J, Buffard D, Jouanin L, Lapierre C (2008). Redirection of the phenylpropanoid pathway to feruloyl malate in Arabidopsis mutants deficient for cinnamoyl-CoA reductase 1. Planta, 227:943-956. PubMed | DOI
Ralph J, Kim H, Lu F, Grabber JH, Leple JC, Berrio-Sierra J, Derikvand MM, Jouanin L, Boerjan W, Lapierre C (2008). Identification of the structure and origin of a thioacidolysis marker compound for ferulic acid incorporation into angiosperm lignins (and an indicator for cinnamoyl CoA reductase deficiency). Plant J, 53:368-379. PubMed | DOI
Ravalason H, Jan G, Molle D, Pasco M, Coutinho PM, Lapierre C, Pollet B, Bertaud F, Petit-Conil M, Grisel S, Sigoillot JC, Asther M, Herpoel-Gimbert I (2008). Secretome analysis of Phanerochaete chrysosporium strain CIRM-BRFM41 grown on softwood. Appl Microbiol Biotechnol, 80:719-733. PubMed | DOI
Ruggeberg M, Speck T, Paris O, Lapierre C, Pollet B, Koch G, Burgert I (2008). Stiffness gradients in vascular bundles of the palm Washingtonia robusta. Proc Biol Sci, 275:2221-2229. PubMed | DOI
Tellier F, Fritz R, Kerhoas L, Ducrot PH, Einhorn J, Carlin-Sinclair A, Leroux P (2008). Characterization of metabolites of fungicidal cymoxanil in a sensitive strain of Botrytis cinerea. J Agric Food Chem, 56:8050-8057. PubMed | DOI
Beopoulos A, Mrozova Z, Thevenieau F, Le Dall MT, Hapala I, Papanikolaou S, Chardot T, Nicaud JM (2008). Control of lipid accumulation in the yeast Yarrowia lipolytica. Appl Environ Microbiol, 74:7779-7789. PubMed | DOI
Gohon Y, Dahmane T, Ruigrok RW, Schuck P, Charvolin D, Rappaport F, Timmins P, Engelman DM, Tribet C, Popot JL, Ebel C (2008). Bacteriorhodopsin/amphipol complexes: structural and functional properties. Biophys J, 94:3523-3537. PubMed | DOI
Jolivet P, Boulard C, Chardot T, Anton M (2008). New insights into the structure of apolipoprotein B from low-density lipoproteins and identification of a novel YGP-like protein in hen egg yolk. J Agric Food Chem, 56:5871-5879. PubMed | DOI
Kopecný D, Sebela M, Briozzo P, Spíchal L, Houba-Herin N, Masek V, Joly N, Madzak C, Anzenbacher P, Laloue M (2008). Mechanism-based inhibitors of cytokinin oxidase/dehydrogenase attack FAD cofactor. J Mol Biol, 380:886-899. PubMed | DOI
Lauriere M, Gorner P, Bouchez-Mahiout I, Wrobel R, Breton C, Fabries JF, Choudat D (2008). Physical and biochemical properties of airborne flour particles involved in occupational asthma. Ann Occup Hyg, 52:727-737. PubMed | DOI
Meyer P, Evrin C, Briozzo P, Joly N, Barzu O, Gilles AM (2008). Structural and functional characterization of Escherichia coli UMP kinase in complex with its allosteric regulator GTP. J Biol Chem, 283:36011-36018. PubMed | DOI
Purkrtova Z, Jolivet P, Miquel M, Chardot T (2008). Structure and function of seed lipid-body-associated proteins. C R Biol, 331:746-754. PubMed | DOI
Purkrtova Z, Le Bon C, Kralova B, Ropers MH, Anton M, Chardot T (2008). Caleosin of Arabidopsis thaliana : Effect of Calcium on Functional and Structural Properties. J Agric Food Chem, 56:11217-11224. PubMed | DOI
Stranska J, Snegaroff J, Tylichova M, Kopecný D, Sebela M (2008). Cloning and expression of plant ornithine delta-aminotransferase. FEBS J, 275:177-177. PubMed | DOI
Tylichova M, Briozzo P, Kopecný D, Ferrero J, Moréra S, Joly N, Snegaroff J, Sebela M (2008). Purification, crystallization and preliminary crystallographic study of a recombinant plant aminoaldehyde dehydrogenase from Pisum sativum. Acta Crystallogr Sect F Struct Biol Cryst Commun, 64:88-90. PubMed | DOI
Barrero JM, Rodriguez PL, Quesada V, Alabadi D, Blazquez MA, Boutin JP, Marion-Poll A, Ponce MR, Micol JL (2008). The ABA1 gene and carotenoid biosynthesis are required for late skotomorphogenic growth in Arabidopsis thaliana. Plant Cell Environ, 31:227-234. PubMed | DOI
Ghanem A, Bados P, Perreau F, Benabdallah R, Plagellat C, De Alencastro LF, Einhorn J (2008). Multiresidue analysis of atrazine, diuron and their degradation products in sewage sludge by liquid chromatography tandem mass spectrometry. Anal Bioanal Chem, 391:345-352. PubMed | DOI
Holdsworth MJ, Finch-Savage WE, Grappin P, Job D (2008). Post-genomics dissection of seed dormancy and germination. Trends Plant Sci, 13:7-13. PubMed | DOI
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