Biomass, Seeds and Bioproducts

Arc E, Galland M, Cueff G, Godin B, Lounifi I, Job D, Rajjou L (2011). Reboot the system thanks to protein post-translational modifications and proteome diversity: How quiescent seeds restart their metabolism to prepare seedling establishment. Proteomics, 11:1606-1618. PubMed | DOI

Ghanem ME, Hichri I, Smigocki AC, Albacete A, Fauconnier ML, Diatloff E, Martinez-Andujar C, Lutts S, Dodd IC, Perez-Alfocea F (2011). Root-targeted biotechnology to mediate hormonal signalling and improve crop stress tolerance. Plant Cell Rep, 30:807-823. PubMed | DOI

Grappin P, Collet B, Yang H, Jallet D, Ogé L, Zubarev R (2011). New proteomic developments to analyze protein isomerization and their biological significance in plants. J Proteomics, 74:1475-1482. PubMed | DOI

Lefebvre V, Fortabat MN, Ducamp A, North HM, Maia-Grondard A, Trouverie J, Boursiac Y, Mouille G, Durand-Tardif M (2011). ESKIMO1 disruption in Arabidopsis alters vascular tissue and impairs water transport. PLoS One, 6:e16645. PubMed | DOI

Plessis A, Cournol R, Effroy D, Silva Perez V, Botran L, Kraepiel Y, Frey A, Sotta B, Cornic G, Leung J, Giraudat J, Marion-Poll A, North HM (2011). New ABA-hypersensitive Arabidopsis mutants are affected in loci mediating responses to water deficit and Dickeya dadantii infection. PLoS One, 6:e20243. PubMed | DOI

Rajjou L, Belghazi M, Catusse J, Ogé L, Arc E, Godin B, Chibani K, Ali-Rachidi S, Collet B, Grappin P, Jullien M, Gallardo K, Job C, Job D (2011). Proteomics and posttranslational proteomics of seed dormancy and germination. Methods Mol Biol, 773:215-236. PubMed | DOI

Wilson A, Punginelli C, Couturier M, Perreau F, Kirilovsky D (2011). Essential role of two tyrosines and two tryptophans on the photoprotection activity of the Orange Carotenoid Protein. Biochim Biophys Acta, 1807:293-301. PubMed | DOI

Sullivan S, Ralet MC, Berger A, Diatloff E, Bischoff V, Gonneau M, Marion-Poll A, North HM (2011). CESA5 is required for the synthesis of cellulose with a role in structuring the adherent mucilage of Arabidopsis seeds. Plant Physiol, 156:1725-1739. PubMed | DOI

Aubert A, Marion J, Boulogne C, Bourge M, Abreu S, Bellec Y, Faure JD, Satiat-Jeunemaitre B (2011). Sphingolipids involvement in plant endomembrane differentiation: the BY2 case. Plant J, 65:958-971. PubMed | DOI

Bach L, Gissot L, Marion J, Tellier F, Moreau P, Satiat-Jeunemaitre B, Palauqui JC, Napier JA, Faure JD (2011). Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana. J Cell Sci, 124:3223-3234. PubMed | DOI

Markham JE, Molino D, Gissot L, Bellec Y, Hématy K, Marion J, Belcram K, Palauqui JC, Satiat-Jeunemaitre B, Faure JD (2011). Sphingolipids containing very-long-chain fatty acids define a secretory pathway for specific polar plasma membrane protein targeting in Arabidopsis. Plant Cell, 23:2362-2378. PubMed | DOI

Melser S, Molino D, Batailler B, Peypelut M, Laloi M, Wattelet-Boyer V, Bellec Y, Faure JD, Moreau P (2011). Links between lipid homeostasis, organelle morphodynamics and protein trafficking in eukaryotic and plant secretory pathways. Plant Cell Rep, 30:177-193. PubMed | DOI

Palauqui JC, Laufs P (2011). Phyllotaxis: in search of the golden angle. Curr Biol, 21:R502-504. PubMed | DOI

Berger N, Dubreucq B, Roudier F, Dubos C, Lepiniec L (2011). Transcriptional regulation of Arabidopsis LEAFY COTYLEDON2 involves RLE, a cis-element that regulates trimethylation of histone H3 at lysine-27. Plant Cell, 23:4065-4078. PubMed | DOI

Pouvreau B, Baud S, Vernoud V, Morin V, Py C, Gendrot G, Pichon JP, Rouster J, Paul W, Rogowsky PM (2011). Duplicate maize Wrinkled1 transcription factors activate target genes involved in seed oil biosynthesis. Plant Physiol, 156:674-686. PubMed | DOI

Roudier F, Ahmed I, Berard C, Sarazin A, Mary-Huard T, Cortijo S, Bouyer D, Caillieux E, Duvernois-Berthet E, Al-Shikhley L, Giraut L, Despres B, Drevensek S, Barneche F, Derozier S, Brunaud V, Aubourg S, Schnittger A, Bowler C, Martin-Magniette ML, Robin S, Caboche M, Colot V (2011). Integrative epigenomic mapping defines four main chromatin states in Arabidopsis. EMBO J, 30:1928-1938. PubMed | DOI

Bouxin F, Baumberger S, Pollet B, Haudrechy A, Renault JH, Dole P (2010). Acidolysis of a lignin model: investigation of heterogeneous catalysis using Montmorillonite clay. Bioresour Technol, 101:736-744. PubMed | DOI

Demont-Caulet N, Lapierre C, Jouanin L, Baumberger S, Méchin V (2010). Arabidopsis peroxidase-catalyzed copolymerization of coniferyl and sinapyl alcohols: kinetics of an endwise process. Phytochemistry, 71:1673-1683. PubMed | DOI

Ducrot PH, Allais F (2010). Stereoselective Total Synthesis of (+)-Dodoneine. Synthesis, 2010:1649-1653. PubMed | DOI

Ducrot PH, Allais F, Aouhansou M, Majira A (2010). Asymmetric Total Synthesis of Rugulactone, an ?-Pyrone from Cryptocarya rugulosa. Synthesis, 2010:2787-2793. PubMed | DOI

Laffont C, Blanchet S, Lapierre C, Brocard L, Ratet P, Crespi M, Mathesius U, Frugier F (2010). The compact root architecture1 gene regulates lignification, flavonoid production, and polar auxin transport in Medicago truncatula. Plant Physiol, 153:1597-1607. PubMed | DOI

Legay S, Sivadon P, Blervacq AS, Pavy N, Baghdady A, Tremblay L, Levasseur C, Ladouce N, Lapierre C, Seguin A, Hawkins S, Mackay J, Grima-Pettenati J (2010). EgMYB1, an R2R3 MYB transcription factor from eucalyptus negatively regulates secondary cell wall formation in Arabidopsis and poplar. New Phytol, 188:774-786. PubMed | DOI

Lu F, Marita JM, Lapierre C, Jouanin L, Morreel K, Boerjan W, Ralph J (2010). Sequencing around 5-hydroxyconiferyl alcohol-derived units in caffeic acid O-methyltransferase-deficient poplar lignins. Plant Physiol, 153:569-579. PubMed | DOI

Nélieu S, Bonnemoy F, Bonnet JL, Lefeuvre L, Baudiffier D, Heydorff M, Quemeneur A, Azam D, Ducrot PH, Lagadic L, Bohatier J, Einhorn J (2010). Ecotoxicological effects of diuron and chlorotoluron nitrate-induced photodegradation products: monospecific and aquatic mesocosm-integrated studies. Environ Toxicol Chem, 29:2644-2652. PubMed | DOI

Stévenin A, Boyer FD, Beau JM (2010). Regioselective control in the oxidative cleavage of 4,6-O-benzylidene acetals of glycopyranosides by dimethyldioxirane. J Org Chem, 75:1783-1786. PubMed | DOI

Bouchez-Mahiout I, Boulenc E, Snegaroff J, Choudat D, Pecquet C, Raison-Peyron N, Vigan M, Chabane H, Dron-Gonzalves M, Branlard G, Tanis-Plant S, Lauriere M (2010). Immunoblotting analysis of wheat allergens: control of side reactions through wheat polypeptides naturally present in dried cow milk. Food and Agricultural Immunology, 21:237-251. PubMed | DOI

Bouchez-Mahiout I, Pecquet C, Kerre S, Snegaroff J, Raison-Peyron N, Lauriere M (2010). High molecular weight entities in industrial wheat protein hydrolysates are immunoreactive with IgE from allergic patients. J Agric Food Chem, 58:4207-4215. PubMed | DOI

Bouchez-Mahiout I, Snegaroff J, Tylichova M, Pecquet C, Branlard G, Lauriere M (2010). Low molecular weight glutenins in wheat-dependant, exercise-induced anaphylaxis: allergenicity and antigenic relationships with omega 5-gliadins. Int Arch Allergy Immunol, 153:35-45. PubMed | DOI

Kopecný D, Briozzo P, Popelkova H, Sebela M, Koncitíková R, Spíchal L, Nisler J, Madzak C, Frebort I, Laloue M, Houba-Herin N (2010). Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study. Biochimie, 92:1052-1062. PubMed | DOI

Pedrono F, Blanchard H, Kloareg M, D'Andrea S, Daval S, Rioux V, Legrand P (2010). The fatty acid desaturase 3 gene encodes for different FADS3 protein isoforms in mammalian tissues. J Lipid Res, 51:472-479. PubMed | DOI

Stranska J, Tylichova M, Kopecný D, Snegaroff J, Sebela M (2010). Biochemical characterization of pea ornithine-delta-aminotransferase: substrate specificity and inhibition by di- and polyamines. Biochimie, 92:940-948. PubMed | DOI

Tylichova M, Kopecný D, Moréra S, Briozzo P, Lenobel R, Snegaroff J, Sebela M (2010). Structural and functional characterization of plant aminoaldehyde dehydrogenase from Pisum sativum with a broad specificity for natural and synthetic aminoaldehydes. J Mol Biol, 396:870-882. PubMed | DOI

Mamy L, Vrignaud P, Cheviron N, Perreau F, Belkacem M, Brault A, Breuil S, Delarue G, Pétraud JP, Touton I, Mougin C, Chaplain V (2010). No evidence for effect of soil compaction on the degradation and impact of isoproturon. Environ Chem Lett, 9:145-150. PubMed | DOI

North HM, Baud S, Debeaujon I, Dubos C, Dubreucq B, Grappin P, Jullien M, Lepiniec L, Marion-Poll A, Miquel M, Rajjou L, Routaboul JM, Caboche M (2010). Arabidopsis seed secrets unravelled after a decade of genetic and omics-driven research. Plant J, 61:971-981. PubMed | DOI

Wilson A, Kinney JN, Zwart PH, Punginelli C, D'haene S, Perreau F, Klein MG, Kirilovsky D, Kerfeld CA (2010). Structural determinants underlying photoprotection in the photoactive orange carotenoid protein of cyanobacteria. J Biol Chem, 285:18364-18375. PubMed | DOI

Bach L, Faure JD (2010). Role of very-long-chain fatty acids in plant development, when chain length does matter. C R Biol, 333:361-370. PubMed | DOI

Harscoet E, Dubreucq B, Palauqui JC, Lepiniec L (2010). NOF1 encodes an Arabidopsis protein involved in the control of rRNA expression. PLoS One, 5:e12829. PubMed | DOI

Lachaud C, Da Silva D, Cotelle V, Thuleau P, Xiong TC, Jauneau A, Briere C, Graziana A, Bellec Y, Faure JD, Ranjeva R, Mazars C (2010). Nuclear calcium controls the apoptotic-like cell death induced by d-erythro-sphinganine in tobacco cells. Cell Calcium, 47:92-100. PubMed | DOI

Melser S, Batailler B, Peypelut M, Poujol C, Bellec Y, Wattelet-Boyer V, Maneta-Peyret L, Faure JD, Moreau P (2010). Glucosylceramide biosynthesis is involved in Golgi morphology and protein secretion in plant cells. Traffic, 11:479-490. PubMed | DOI

Roudier F, Gissot L, Beaudoin F, Haslam R, Michaelson L, Marion J, Molino D, Lima A, Bach L, Morin H, Tellier F, Palauqui JC, Bellec Y, Renne C, Miquel M, Dacosta M, Vignard J, Rochat C, Markham JE, Moreau P, Napier J, Faure JD (2010). Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis. Plant Cell, 22:364-375. PubMed | DOI

Van Leene J, Hollunder J, Eeckhout D, Persiau G, Van De Slijke E, Stals H, Van Isterdael G, Verkest A, Neirynck S, Buffel Y, De Bodt S, Maere S, Laukens K, Pharazyn A, Ferreira PC, Eloy N, Renne C, Meyer C, Faure JD, Steinbrenner J, Beynon J, Larkin JC, Van De Peer Y, Hilson P, Kuiper M, De Veylder L, Van Onckelen H, Inzé D, Witters E, De Jaeger G (2010). Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Mol Syst Biol, 6:397. PubMed | DOI

Wuyts N, Palauqui JC, Conejero G, Verdeil JL, Granier C, Massonnet C (2010). High-contrast three-dimensional imaging of the Arabidopsis leaf enables the analysis of cell dimensions in the epidermis and mesophyll. Plant Methods, 6:17. PubMed | DOI

Auger B, Marnet N, Gautier V, Maia-Grondard A, Leprince F, Renard M, Guyot S, Nesi N, Routaboul JM (2010). A detailed survey of seed coat flavonoids in developing seeds of Brassica napus L. J Agric Food Chem, 58:6246-6256. PubMed | DOI

Baud S, Feria-Bourrellier AB, Azzopardi M, Berger A, Dechorgnat J, Daniel-Vedele F, Lepiniec L, Miquel M, Rochat C, Hodges M, Ferrario-Méry S (2010). PII is induced by WRINKLED1 and fine-tunes fatty acid composition in seeds of Arabidopsis thaliana. Plant J, 64:291-303. PubMed | DOI

Baud S, Lepiniec L (2010). Physiological and developmental regulation of seed oil production. Prog Lipid Res, 49:235-249. PubMed | DOI

Caboche M (2010). Specificities of plant development. C R Biol, 333:288-289. PubMed | DOI

Dubos C, Stracke R, Grotewold E, Weisshaar B, Martin C, Lepiniec L (2010). MYB transcription factors in Arabidopsis. Trends Plant Sci, 15:573-581. PubMed | DOI

Assor C, Placet V, Chabbert B, Habrant A, Lapierre C, Pollet B, Perre P (2009). Concomitant changes in viscoelastic properties and amorphous polymers during the hydrothermal treatment of hardwood and softwood. J Agric Food Chem, 57:6830-6837. PubMed | DOI

Barriere Y, Méchin V, Riboulet C, Guillaumie S, Thomas J, Bosio M, Fabre F, Goffner D, Pichon M, Lapierre C, Martinant JP (2009). Genetic and genomic approaches for improving biofuel production from maize. Euphytica, 170:183-202. PubMed | DOI

Dignac MF, Pechot N, Thevenot M, Lapierre C, Bahri H, Bardoux G, Rumpel C (2009). Isolation of soil lignins by combination of ball-milling and cellulolysis: Evaluation of purity and isolation efficiency with pyrolysis/GC/MS. Journal of Analytical and Applied Pyrolysis, 85:426-430. PubMed | DOI