Biomasse, Graines et Bioproduits

Le Boulch P, Missinou AA, Boutet S, Perreau F, Manzanares-Dauleux MJ, Falentin C, Filangi O, Lariagon C, Bouchereau A, Rousseau-Gueutin M, Corso M, Gravot A (2026). Metabolomic analysis of a core collection of Brassica rapa and Brassica oleracea unveils unexpected chemical diversity with potential applications in chemical ecology and breeding. BMC Plant Biol, doi: 10.1186/s12870-026-08269-4. PubMed | DOI

Zinsmeister J, Sano N, Lounifi I, Groot SP, He D, Lagesse M, Balzergue S, Huguet S, Huguet R, Collet B, Cueff G, Clément G, Rajjou L, Galland M (2026). Combined "omics" and physiological approaches highlight the roles of the GABA shunt and mitochondria-related functions in rice seed longevity. Plant Physiol Biochem, 232:111094. PubMed | DOI

Dourmap C, Baud S, Eubel H, Rugen N, Crilat E, Beradocco S, Marnet N, Clément G, Tcherkez G, Planchais S, Cabassa C, Lebreton S, Bordenave-Jacquemin M, Maldiney R, Carol P, Braun HP, Masclaux-Daubresse C, Bouchereau A, Savouré A, Guivarc'h A (2026). Pyrroline-5-carboxylate dehydrogenase is a key actor of nitrogen metabolism in maturing seeds of Arabidopsis thaliana. J Exp Bot, eraf542. PubMed | DOI

Vita N, Holmière M, Mejia-Otalvaro F, Debard F, Degeilh L, Gagnot S, Crônier D, Habrant A, Pion F, Denis Y, Sciara G, Faulds C, Monteil C, Santini S, Ducrot PH, Perret S, Aguié-Béghin V, Panis G, Record E, Chabbert B, Fierobe HP (2025). Uncovering enzymatic tools promoting lignocellulose breakdown in the anaerobic bacterium Ruminiclostridium cellulolyticum. Commun Biol, 9(1):24. PubMed | DOI

Vayssières A, Boutet S, Totozafy JC, Tellier F, Winkler M, Barreda L, Vicino M, Da Costa A, Corso M, Faure JD (2025). Distinct Metabolic Signatures Associated With Drought Response, Shoot Architecture And Flowering time In Camelina. Plant Cell Physiol, pcaf150. PubMed | DOI

Tarkowski ŁP, Hubert B, Marchi M, Tranchant M, Boutet S, Brosse C, Causse M, Balliau T, Blein-Nicolas M, Corso M, Aubourg S, Verdier J (2025). Antimicrobial Peptides as Part of the Arsenal of Constitutive and Inducible Seed Defences in Tomato Seed Exudates Against Pathogens. Mol Plant Pathol, 26(10):e70164. PubMed | DOI

Routaboul J, Corso M, Lepiniec L (2025). Flavonoid characterization: It takes more than Arabidopsis seed colours!. Planta, 262(5):112. PubMed | DOI

Ferchaud N, Kopečný D, Peřina M, Boyer A, Hentati-Mansouri S, Pontoizeau C, Desterke C, Kryštof V, Machover D, Briozzo P (2025). The methioninase from the alkalithermophile Thermobrachium celere possesses suitable properties for treatment of cancer. Int J Biol Macromol, 330(Pt 2):147876. PubMed | DOI

Decouard B, Rigault M, Quilleré I, Boutet S, Adam G, Cueff G, Perreau F, Alunni B, Dellagi A (2025). An aeroponic system to characterize maize root exudates in relation to N and P nutrition and arbuscular mycorrhizal symbiosis. J Exp Bot, eraf356. PubMed | DOI

Salaün C, Thévenin J, Edoura Gaena A, Qiu Y, Burguet J, Miquel M, Lepiniec L, Dubreucq B (2025). The characterization of the LEAFY COTYLEDON 2 activation domains reveals its conserved dual mode of action in flowering plants. Plant J,123(4):e70380. PubMed | DOI

Babić D, Abualia R, Fiedler L, Qi L, Tellier F, Smoljan A, Rakusová H, Valošek P, Han H, Benková E, Faure JD, Friml J (2025). Biosynthesis of very Long-chain fatty acids is required for Arabidopsis auxin-mediated embryonic and post-embryonic development. Plant J, 123(3):e70396. PubMed | DOI

Saccaram C, Simonin M, Boutet S, Brosse C, Peng S, Francois T, Collet B, Perreau F, Sourdeval D, Marais C, Barret M, Rajjou L, Corso M (2025). Elucidating the interplay between metabolites and microorganisms in the spermosphere of common bean (Phaseolus vulgaris L.) seeds. mSystems, 10(8):e0070725. PubMed | DOI

Miray R, Frazzetto P, To A, Ratahiry S, De Vos D, Toorop PE, Puglia GD, Baud S (2025). Comparative analysis of storage compound metabolism in the embryo and endosperm of Cakile maritima seeds. J Exp Bot, 17:eraf314. PubMed | DOI

Lécureuil A, Corso M, Boutet S, Le Gall S, Niñoles R, Gadea J, Guerche P, Jasinski S (2025). Innovative screening for mutants affected in seed oil/protein allocation identifies TRANSPARENT TESTA7 as a regulator of oil accumulation. Plant J, 122(6):e70269. PubMed | DOI

Baumberger S (2025). Analytical strategies for the investigation of enzymatic and microbial ligninolytic activities. Methods Enzymol, 716:1-31. PubMed | DOI

Dainelli M, Cicchi C, Baccelli I, Boutet S, Colzi I, Coppi A, Luti S, Pignattelli S, Pollastri S, Loreto F, Pazzagli L, Corso M, Gonnelli C (2025). Microplastics in the Soil at Sub-Toxic Concentrations Cause Metabolic Changes Decreasing Fungal Pathogen Susceptibility in Arabidopsis thaliana. Physiol Plant, 177(3):e70312. PubMed | DOI

Blanchard C, Aimé S, Ducloy A, Hichami S, Azzopardi M, Cacas JL, Lamotte O (2025). The IRE1-bZIP60 branch of Unfolded Protein Response is required for Arabidopsis immune response to Botrytis cinerea. J Exp Bot, eraf244. PubMed | DOI

Labat V, Louis-Mondésir C, Hentati-Mansouri S, Totozafy JC, Collet B, Gohon Y, Davanture M, Gromova M, Rajjou L, Mameri H, Chardot T (2025). Modifications in lipids and storage proteins composition during germination of chia seeds (Salvia hispanica L.). Food Chem, 489:144682. PubMed | DOI

Suzuki H, Savane P, Marion-Poll L, Séchet J, Frey A, Berger A, Belcram K, Borrega N, Seo M, Voxeur A, Mouille G, Marion-Poll A (2025). Analysis of xyloglucan metabolism mutants highlights the prominent role of xylose cleavage in seed dormancy. Plant J, 122(1):e70063. PubMed | DOI

Hladík P, Brunoni F, Žukauskaitė A, Zatloukal M, Bělíček J, Kopečný D, Briozzo P, Ferchaud N, Novák O, Pěnčík A (2025). Phenylacetic acid metabolism in land plants: novel pathways and metabolites. J Exp Bot, eraf092. PubMed | DOI

Miray R, Kazaz S, To A, Baud S (2025). Identification of a promoter region specifically active in the maturing endosperm of Arabidopsis seeds and its use for targeted modification of fatty acid metabolism. Plant J, 121(5):e70038. PubMed | DOI

Barreda L, Boutet S, De Vos D, Boulard C, Grain D, Lepiniec L, Corso M (2025). Specialized metabolome and transcriptome atlas of developing Arabidopsis thaliana seed under warm temperatures. Sci Data, 12(1):306. PubMed | DOI

Barreda L, Brosse C, Boutet S, Klewko N, De Vos D, Francois T, Collet B, Grain D, Boulard C, Totozafy JC, Bernay B, Perreau F, Lepiniec L, Rajjou L, Corso M (2025). Multi-omic analyses unveil contrasting composition and spatial distribution of specialized metabolites in seeds of Camelina sativa and other Brassicaceae. Plant J, 121(3):e17231. PubMed | DOI

Ricou A, Simon M, Duflos R, Azzopardi M, Roux F, Budar F, Camilleri C (2025). Identification of novel genes responsible for a pollen killer present in local natural populations of Arabidopsis thaliana. PLoS Genet, 21(1):e1011451. PubMed | DOI

Liang W, Zamarreño AM, Torres-Montilla S, de la Torre A, Totozafy JC, Kaji T, Ueda M, Corso M, Garcia-Mina JM, Solano R, Chini A (2024). dn-OPDA conjugation with amino acids inhibits its phytohormone bioactivity in Marchantia polymorpha. Plant Physiol, kiae610. PubMed | DOI

Avezum L, Ollier L, Siguemoto E, Rajjou L, Mestres C (2024). Hydrolysis and diffusion of raffinose oligosaccharides family products in chickpeas, lentils, and beans under different pH and temperature steeping conditions. Food Res Int, 191:114732. PubMed | DOI

Rivière Q, Raskin V, de Melo R, Boutet S, Corso M, Defrance M, Webb AAR, Verbruggen N, Anoman AD (2024). Effects of light regimes on circadian gene co-expression networks in Arabidopsis thaliana. Plant Direct, 8(8):e70001. PubMed | DOI

Liu C, Hatzianestis IH, [...], D'Andrea S, [....], Bozhkov PV, Moschou PN (2024). Seed longevity is controlled by metacaspases. Nat Commun, 15(1):6748. PubMed | DOI

Peng S, Rajjou L (2024). Advancing plant biology through deep learning-powered natural language processing. Plant Cell Rep, 43(8):208. PubMed | DOI

Raimondi D, Passemiers A, Verplaetse N, Corso M, Ferrero-Serrano A, Nazzicari N, Biscarini F, Fariselli P, Moreau Y (2024). Biologically meaningful genome interpretation models to address data underdetermination for the leaf and seed ionome prediction in Arabidopsis thaliana. Sci Rep, 14(1):13188. PubMed | DOI

Dhahak A, Cézard L, Baumberger S, Peixinho J (2024). Kinetic, products and shrinkage for the pyrolysis of flax fibers. Journal of Analytical and Applied Pyrolysis, Vol 180, 106538. DOI

Jayabalan T, Pandard P, Binotto G, Gomes J, Ceschini X, Aube A, Gondelle F, Pion F, Baumberger S, Jongerius A, Gosselink RJA, Cozzoni E, Marlair G (2024). Safety profiling of technical lignins originating from various bioresources and conversion processes. Heliyon, 10(12):e32131. PubMed | DOI

Amokrane L, Pokotylo I, Acket S, Ducloy A, Troncoso-Ponce MA, Cacas JL, Ruelland E (2024). Phospholipid Signaling in Crop Plants: A Field to Explore. Plants, 13(11):1532. PubMed | DOI

Nisler J, Klimeš P, Koncitíková R, Kadlecová A, Voller J, Chalaki M, Karampelias M, Murvanidze N, Werbrouck SPO, Kopečný D, Havlícek L, De Diego N, Briozzo P, Moréra S, Zalabák D, Spíchal L (2024). Cytokinin oxidase/dehydrogenase inhibitors: progress towards agricultural practice. J Exp Bot, erae239. PubMed | DOI

Bhati KK, Luong AM, Dittrich-Domergue F, D'Andrea S, Moreau P, Batoko H (2024). Possible crosstalk between the Arabidopsis TSPO-related protein and the transcription factor WRINKLED1. Biochimie, S0300-9084(24)00105-6. PubMed | DOI

Chelysheva L, Morin H, Biot E, Nicolas A, Rech P, Da Costa M, Barel L, Laufs P, Palauqui JC (2024). M2WISH: An easy and efficient protocol for whole-mount mRNA in situ hybridization that allows 3D cell resolution of gene expression in Arabidopsis thaliana. Plant J, doi: 10.1111/tpj.16792. PubMed | DOI

Piedrahita-Rodríguez S, Alzate-Ramírez AF, Baumberger S, Cézard L, Ortiz-Sánchez M, Garcia DAE, Arenas AMZ, Moustakas K, Alzate CAC (2024). Strategy for the analysis of lignocellulosic biomass to select a viable transformation route in the Colombian context. Environ Sci Pollut Res Int, 2024 May 2. PubMed | DOI

Hadjiefstathiou C, Manière A, Attia J, Pion F, Ducrot PH, Gore E, Grisel M (2024). Lignins interfacial behavior tailored by formulation parameters. Journal of Molecular Liquids, 399: 124415. DOI

Goelzer A, Rajjou L, Chardon F, Loudet O, Fromion V (2024). Resource allocation modeling for autonomous prediction of plant cell phenotypes. Metab Eng, 83:86-101. PubMed | DOI

Kacprzyk J, Burke R, Armengot L, Coppola M, Tattrie SB, Vahldick H, Bassham DC, Bosch M, Brereton NJB, Cacas JL, Coll NS, Gallois P, Kuchitsu K, Nowack MK, Rogers HJ, Van Breusegem F, Gunawardena AH, McCabe PF (2024). Roadmap for the next decade of plant programmed cell death research. New Phytol, 242(5):1865-1875. PubMed | DOI

Rashid GMM, Rivière G, Cottyn B, Majira A, Cézard L, Sodré V, Lam R, Fairbairn JA, Baumberger S, Bugg TDH (2024). Ether Bond Cleavage of a Phenylcoumaran β-5 Lignin Model Compound and Polymeric Lignin Catalysed by a LigE-type Etherase from Agrobacterium sp. Chembiochem, e202400132. PubMed | DOI

Ducloy A, Azzopardi M, Ivsic C, Cueff G, Sourdeval D, Charif D, Cacas JL (2024). A transcriptomic dataset for investigating the Arabidopsis Unfolded Protein Response under chronic, proteotoxic endoplasmic reticulum stress. Data Brief, 53:110243. PubMed | DOI

Barreda L, Brosse C, Boutet S, Perreau F, Rajjou L, Lepiniec L, Corso M (2024). Specialized metabolite modifications in Brassicaceae seeds and plants: diversity, functions and related enzymes. Nat Prod Rep, doi: 10.1039/d3np00043e. PubMed | DOI

Bianchetti G, Clouet V, Legeai F, Baron C, Gazengel K, Vu BL, Baud S, To A, Manzanares-Dauleux MJ, Buitink J, Nesi N (2024). Identification of transcriptional modules linked to the drought response of Brassica napus during seed development and their mitigation by early biotic stress. Physiol Plant, 176(1):e14130. PubMed | DOI

Hadjiefstathiou C, Manière A, Attia J, Pion F, Ducrot PH, Grisel M, Gore E (2024). Sensory signature of lignins, new generation of bio-based ingredients in cosmetics. Int J Biol Macromol, 260(1):129399. PubMed | DOI

Gissot L, Fontaine F, Kelemen Z, Dao O, Bouchez I, Deruyffelaere C, Winkler M, Da Costa A, Pierre F, Meziadi C, Faure JD, Froissard M (2023). E and M SARS-CoV-2 membrane protein expression and enrichment with plant lipid droplets. Biotechnol J, e2300512. PubMed | DOI

Aoi Y, Benamar A, Saulnier L, Ralet MC, North HM (2023). Biochemical data documenting variations in mucilage polysaccharides in a range of glycosyltransferase mutants. Sci Data, 10(1):702. PubMed | DOI

Chen X, Ferchaud N, Briozzo P, Machover D, Simonson T (2023). PLP-Dependent Enzyme Methionine γ-Lyase: Insights into the Michaelis Complex from Molecular Dynamics and Free Energy Simulations. Biochemistry, doi: 10.1021/acs.biochem.3c00355. PubMed | DOI

Lailheugue V, Merlin I, Boutet S, Perreau F, Pouvreau JB, Delgrange S, Ducrot PH, Cottyn B, Mouille G, Lauvergeat V (2023). Vitislactone, a non-canonical strigolactone exudated by grapevine rootstocks in response to nitrogen starvation. Phytochemistry, 215:113837. PubMed | DOI

Piedrahita-Rodríguez S, Baumberger S, Cézard L, Poveda-Giraldo J, Alzate-Ramírez AF, Alzate CAC (2023). Comparative Analysis of Trifluoracetic Acid Pretreatment for Lignocellulosic Materials. Materials, 16(15):5502. PubMed | DOI