Research departments

Biomass, Seeds and Bioproducts

BSB 5 research teams

IJPB publications (2006-to date)
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Séchet J, Frey A, Effroy-Cuzzi D, Berger A, Perreau F, Cueff G, Charif D, Rajjou L, Mouille G, North HM, Marion-Poll A (2016). Xyloglucan Metabolism Differentially Impacts the Cell Wall Characteristics of the Endosperm and Embryo during Arabidopsis Seed Germination. Plant Physiol, 170:1367-1380. PubMed | DOI
Seo M, Kanno Y, Frey A, North HM, Marion-Poll A (2016). Dissection of Arabidopsis NCED9 promoter regulatory regions reveals a role for ABA synthesized in embryos in the regulation of GA-dependent seed germination. Plant Sci, 246:91-97. PubMed | DOI
Voiniciuc C, Zimmermann E, Schmidt MH, Gunl M, Fu L, North HM, Usadel B (2016). Extensive Natural Variation in Arabidopsis Seed Mucilage Structure. Front Plant Sci, 7:803. PubMed | DOI
Belcram K, Palauqui JC, Pastuglia M (2016). Studying Cell Division Plane Positioning in Early-Stage Embryos 2016. Methods Mol Biol, 1370:183-195. PubMed | DOI
Bure C, Cacas JL, Badoc A, Mongrand S, Schmitter JM (2016). Branched glycosylated inositolphosphosphingolipid structures in plants revealed by MS(3) analysis. J Mass Spectrom, 51:305-308. PubMed | DOI
De Bigault Du Granrut A, Cacas JL (2016). How Very-Long-Chain Fatty Acids Could Signal Stressful Conditions in Plants?. Front Plant Sci, 7:1490. PubMed | DOI
Faure JD, Tepfer M (2016). Camelina, a Swiss knife for plant lipid biotechnology. Ocl, 23:D503. PubMed | DOI
Hématy K, Bellec Y, Podicheti R, Bouteiller N, Anne P, Morineau C, Haslam RP, Beaudoin F, Napier JA, Mockaitis K, Gagliardi D, Vaucheret H, Lange H, Faure JD (2016). The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis. PLoS Genet, 12:e1005817. PubMed | DOI
Michaelson LV, Napier JA, Molino D, Faure JD (2016). Plant sphingolipids: Their importance in cellular organization and adaption. Biochim Biophys Acta, 1861:1329-1335. PubMed | DOI
Morineau C, Gissot L, Bellec Y, Hématy K, Tellier F, Renne C, Haslam R, Beaudoin F, Napier J, Faure JD (2016). Dual Fatty Acid Elongase Complex Interactions in Arabidopsis. PLoS One, 11:e0160631. PubMed | DOI
Baud S, Kelemen Z, Thévenin J, Boulard C, Blanchet S, To A, Payre M, Berger N, Effroy-Cuzzi D, Franco-Zorrilla JM, Godoy M, Solano R, Thevenon E, Parcy F, Lepiniec L, Dubreucq B (2016). Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed. Plant Physiol, 171:1099-1112. PubMed | DOI
Fatihi A, Boulard C, Bouyer D, Baud S, Dubreucq B, Lepiniec L (2016). Deciphering and modifying LAFL transcriptional regulatory network in seed for improving yield and quality of storage compounds. Plant Sci, 250:198-204. PubMed | DOI
Fiume E, De Klein N, Rhee SY, Magnani E (2016). A Framework for Discovering, Designing, and Testing MicroProteins to Regulate Synthetic Transcriptional Modules. Methods Mol Biol, 1482:175-188. PubMed | DOI
Fiume E, Guyon V, Remoue C, Magnani E, Miquel M, Grain D, Lepiniec L (2016). TWS1, a Novel Small Protein, Regulates Various Aspects of Seed and Plant Development. Plant Physiol, 172:1732-1745. PubMed | DOI
Kelemen Z, Przybyla-Toscano J, Tissot N, Lepiniec L, Dubos C (2016). Fast and Efficient Cloning of Cis-Regulatory Sequences for High-Throughput Yeast One-Hybrid Analyses of Transcription Factors. Methods Mol Biol, 1482:139-149. PubMed | DOI
Strenkert D, Limso CA, Fatihi A, Schmollinger S, Basset GJ, Merchant SS (2016). Genetically Programmed Changes in Photosynthetic Cofactor Metabolism in Copper-deficient Chlamydomonas. J Biol Chem, 291:19118-19131. PubMed | DOI
Thévenin J, Xu W, Vaisman L, Lepiniec L, Dubreucq B, Dubos C (2016). The Physcomitrella patens System for Transient Gene Expression Assays. Methods Mol Biol, 1482:151-161. PubMed | DOI
Troncoso-Ponce MA, Barthole G, Tremblais G, To A, Miquel M, Lepiniec L, Baud S (2016). Transcriptional Activation of Two Delta-9 Palmitoyl-ACP Desaturase Genes by MYB115 and MYB118 Is Critical for Biosynthesis of Omega-7 Monounsaturated Fatty Acids in the Endosperm of Arabidopsis Seeds. Plant Cell, 28:2666-2682. PubMed | DOI
Troncoso-Ponce MA, Nikovics K, Marchive C, Lepiniec L, Baud S (2016). New insights on the organization and regulation of the fatty acid biosynthetic network in the model higher plant Arabidopsis thaliana. Biochimie, 120:3-8. PubMed | DOI
Xu W, Fiume E, Coen O, Péchoux C, Lepiniec L, Magnani E (2016). Endosperm and Nucellus Develop Antagonistically in Arabidopsis Seeds. Plant Cell, 28:1343-1360. PubMed | DOI
Aguié-Béghin V, Foulon L, Soto P, Crônier D, Corti E, Legée F, Cézard L, Chabbert B, Maillard MN, Huijgen WJ, Baumberger S (2015). Use of food and packaging model matrices to investigate the antioxidant properties of biorefinery grass lignins. J Agric Food Chem, 63:10022-10031. PubMed | DOI
Barbara I, Flourat A, Allais F (2015). Renewable polymers derived from ferulic acid and biobased diols via ADMET. European Polymer Journal, 62:236-243. PubMed | DOI
Bensussan M, Lefebvre V, Ducamp A, Trouverie J, Gineau E, Fortabat MN, Guillebaux A, Baldy A, Naquin D, Herbette S, Lapierre C, Mouille G, Horlow C, Durand-Tardif M (2015). Suppression of Dwarf and irregular xylem Phenotypes Generates Low-Acetylated Biomass Lines in Arabidopsis. Plant Physiol, 168:452-463. PubMed | DOI
Burge G, Flourat A, Pollet B, Spinnler H, Allais F (2015). 3-Hydroxypropionaldehyde (3-HPA) quantification by HPLC using a synthetic acrolein-free 3-hydroxypropionaldehyde system as analytical standard. RSC Advances, 5:92619-92627. PubMed | DOI
Burge G, Saulou-Berion C, Moussa M, Pollet B, Flourat A, Allais F, Athes V, Spinnler HE (2015). Diversity of Lactobacillus reuteri Strains in Converting Glycerol into 3-Hydroxypropionic Acid. Appl Biochem Biotechnol, 177:923-939. PubMed | DOI
Cottyn B, Rivard M, Majira A, Beauhaire J, Allais F, Martens T, Baumberger S, Ducrot PH (2015). Comparative electrochemical study on monolignols and dimers relevant for the comprehension of the lignification process. Phytochemistry Letters, 13:280-285. PubMed | DOI
Dulermo T, Coze F, Virolle MJ, Méchin V, Baumberger S, Froissard M (2015). Bioconversion of agricultural lignocellulosic residues into branched-chain fatty acids usingStreptomyces lividans. Ocl, 23:A202. PubMed | DOI
Flourat AL, Peru AaM, Teixeira ARS, Brunissen F, Allais F (2015). Chemo-enzymatic synthesis of key intermediates (S)-?-hydroxymethyl-?,?-butenolide and (S)-?-hydroxymethyl-?-butyrolactone via lipase-mediated Baeyer–Villiger oxidation of levoglucosenone. Green Chemistry, 17:404-412. PubMed | DOI
Oulame M, Pion F, Allauddin S, Raju K, Ducrot P, Allais F (2015). Renewable alternating aliphatic-aromatic poly(ester-urethane)s prepared from ferulic acid and bio-based diols. European Polymer Journal, 63:186-193. PubMed | DOI
Wang Y, Bouchabké-Coussa O, Le Bris P, Antelme S, Soulhat C, Gineau E, Dalmais M, Bendahmane A, Morin H, Mouille G, Legée F, Cézard L, Lapierre C, Sibout R (2015). LACCASE5 is required for lignification of the Brachypodium distachyon Culm. Plant Physiol, 168:192-204. PubMed | DOI
Ayme L, Jolivet P, Nicaud JM, Chardot T (2015). Molecular Characterization of the Elaeis guineensis Medium-Chain Fatty Acid Diacylglycerol Acyltransferase DGAT1-1 by Heterologous Expression in Yarrowia lipolytica. PLoS One, 10:e0143113. PubMed | DOI
Bouchez I, Pouteaux M, Canonge M, Genet M, Chardot T, Guillot A, Froissard M (2015). Regulation of lipid droplet dynamics in Saccharomyces cerevisiae depends on the Rab7-like Ypt7p, HOPS complex and V1-ATPase. Biol Open, 4:764-775. PubMed | DOI
Boulard C, Bardet M, Chardot T, Dubreucq B, Gromova M, Guillermo A, Miquel M, Nesi N, Yen-Nicolay S, Jolivet P (2015). The structural organization of seed oil bodies could explain the contrasted oil extractability observed in two rapeseed genotypes. Planta, 242:53-68. PubMed | DOI
Deruyffelaere C, Bouchez I, Morin H, Guillot A, Miquel M, Froissard M, Chardot T, D'Andrea S (2015). Ubiquitin-Mediated Proteasomal Degradation of Oleosins is Involved in Oil Body Mobilization During Post-Germinative Seedling Growth in Arabidopsis. Plant Cell Physiol, 56:1374-1387. PubMed | DOI
Froissard M, Canonge M, Pouteaux M, Cintrat B, Mohand-Oumoussa S, Guillouet SE, Chardot T, Jacques N, Casaregola S (2015). Lipids containing medium-chain fatty acids are specific to post-whole genome duplication Saccharomycotina yeasts. BMC Evol Biol, 15:97. PubMed | DOI
Mameri H, Brossard C, Gaudin JC, Gohon Y, Paty E, Beaudouin E, Moneret-Vautrin DA, Drouet M, Sole V, Wien F, Lupi R, Larre C, Snegaroff J, Denery-Papini S (2015). Structural Basis of IgE Binding to alpha- and gamma-Gliadins: Contribution of Disulfide Bonds and Repetitive and Nonrepetitive Domains. J Agric Food Chem, 63:6546-6554. PubMed | DOI
Purkrtova Z, Chardot T, Froissard M (2015). N-terminus of seed caleosins is essential for lipid droplet sorting but not for lipid accumulation. Arch Biochem Biophys, 579:47-54. PubMed | DOI
Bourcier De Carbon C, Thurotte A, Wilson A, Perreau F, Kirilovsky D (2015). Biosynthesis of soluble carotenoid holoproteins in Escherichia coli. Sci Rep, 5:9085. PubMed | DOI
Galland M, Rajjou L (2015). Regulation of mRNA translation controls seed germination and is critical for seedling vigor. Front Plant Sci, 6:284. PubMed | DOI
Leverenz RL, Sutter M, Wilson A, Gupta S, Thurotte A, Bourcier De Carbon C, Petzold CJ, Ralston C, Perreau F, Kirilovsky D, Kerfeld CA (2015). PHOTOSYNTHESIS. A 12 A carotenoid translocation in a photoswitch associated with cyanobacterial photoprotection. Science, 348:1463-1466. PubMed | DOI
Nguyen TP, Cueff G, Hegedus DD, Rajjou L, Bentsink L (2015). A role for seed storage proteins in Arabidopsis seed longevity. J Exp Bot, 66:6399-6413. PubMed | DOI
Poncet V, Scutt C, Tournebize R, Villegente M, Cueff G, Rajjou L, Balliau T, Zivy M, Fogliani B, Job C, De Kochko A, Sarramegna-Burtet V, Job D (2015). The Amborella vacuolar processing enzyme family. Front Plant Sci, 6:618. PubMed | DOI
Séchet J, Roux C, Plessis A, Effroy D, Frey A, Perreau F, Biniek C, Krieger-Liszkay A, Macherel D, North HM, Mireau H, Marion-Poll A (2015). The ABA-deficiency suppressor locus HAS2 encodes the PPR protein LOI1/MEF11 involved in mitochondrial RNA editing. Mol Plant, 8:644-656. PubMed | DOI
Voiniciuc C, Schmidt MH, Berger A, Yang B, Ebert B, Scheller HV, North HM, Usadel B, Gunl M (2015). MUCILAGE-RELATED10 Produces Galactoglucomannan That Maintains Pectin and Cellulose Architecture in Arabidopsis Seed Mucilage. Plant Physiol, 169:403-420. PubMed | DOI
Anne P, Azzopardi M, Gissot L, Beaubiat S, Hématy K, Palauqui JC (2015). OCTOPUS Negatively Regulates BIN2 to Control Phloem Differentiation in Arabidopsis thaliana. Curr Biol, 25:2584-2590. PubMed | DOI
De Klein N, Magnani E, Banf M, Rhee SY (2015). microProtein Prediction Program (miP3): A Software for Predicting microProteins and Their Target Transcription Factors. Int J Genomics, 2015:734147. PubMed | DOI
Farace G, Visconti S, Marchive C, Aducci P, Marra M, Trossat-Magnin C (2015). Characterization, functional validation and gene expression patterns of two 14-3-3 isoforms from Vitis vinifera. Vitis, 54:33-40. PubMed | DOI
Grimault A, Gendrot G, Chaignon S, Gilard F, Tcherkez G, Thévenin J, Dubreucq B, Depege-Fargeix N, Rogowsky PM (2015). Role of B3 domain transcription factors of the AFL family in maize kernel filling. Plant Sci, 236:116-125. PubMed | DOI
Grimault A, Gendrot G, Chamot S, Widiez T, Rabille H, Gerentes MF, Creff A, Thévenin J, Dubreucq B, Ingram GC, Rogowsky PM, Depege-Fargeix N (2015). ZmZHOUPI, an endosperm-specific basic helix-loop-helix transcription factor involved in maize seed development. Plant J, 84:574-586. PubMed | DOI
Kelemen Z, Sebastian A, Xu W, Grain D, Salsac F, Avon A, Berger N, Tran J, Dubreucq B, Lurin C, Lepiniec L, Contreras-Moreira B, Dubos C (2015). Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One, 10:e0141044. PubMed | DOI
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