Biomass, Seeds and Bioproducts

Morineau C, Bellec Y, Tellier F, Gissot L, Kelemen Z, Nogué F, Faure JD (2017). Selective gene dosage by CRISPR-Cas9 genome editing in hexaploid Camelina sativa. Plant Biotechnol J, 15:729-739. PubMed | DOI

Querard J, Zhang R, Kelemen Z, Plamont MA, Xie X, Chouket R, Roemgens I, Korepina Y, Albright S, Ipendey E, Volovitch M, Sladitschek HL, Neveu P, Gissot L, Gautier A, Faure JD, Croquette V, Le Saux T, Jullien L (2017). Resonant out-of-phase fluorescence microscopy and remote imaging overcome spectral limitations. Nat Commun, 8:969. PubMed | DOI

Boulard C, Fatihi A, Lepiniec L, Dubreucq B (2017). Regulation and evolution of the interaction of the seed B3 transcription factors with NF-Y subunits. Biochim Biophys Acta Gene Regul Mech, 1860:1069-1078. PubMed | DOI

Coen O, Fiume E, Xu W, De Vos D, Lu J, Péchoux C, Lepiniec L, Magnani E (2017). Developmental patterning of the sub-epidermal integument cell layer in Arabidopsis seeds. Development, 144:1490-1497. PubMed | DOI

Fiume E, Coen O, Xu W, Lepiniec L, Magnani E (2017). Growth of the Arabidopsis sub-epidermal integument cell layers might require an endosperm signal. Plant Signal Behav, 12:e1339000. PubMed | DOI

Fiume E, Coen O, Xu W, Lepiniec L, Magnani E (2017). Developmental patterning of sub-epidermal cells in the outer integument of Arabidopsis seeds. PLoS One, 12:e0188148. PubMed | DOI

Xu W, Bobet S, Le Gourrierec J, Grain D, De Vos D, Berger A, Salsac F, Kelemen Z, Boucherez J, Rolland A, Mouille G, Routaboul JM, Lepiniec L, Dubos C (2017). TRANSPARENT TESTA 16 and 15 act through different mechanisms to control proanthocyanidin accumulation in Arabidopsis testa. J Exp Bot, 68:2859-2870. PubMed | DOI

Baker LA, Horbury MD, Greenough SE, Allais F, Walsh PS, Habershon S, Stavros VG (2016). Ultrafast Photoprotecting Sunscreens in Natural Plants. J Phys Chem Lett, 7:56-61. PubMed | DOI

Broussard O, Petit M, Elie N, Baumberger S, Arnaud A, Ducrot PH, Allais F (2016). Monitoring of free phenol content in lignosulfonates by ClO2 titration and UV difference spectroscopy. Holzforschung, 70:719-724. PubMed | DOI

Hollande L, Jaufurally A, Ducrot PH, Allais F (2016). ADMET polymerization of biobased monomers deriving from syringaresinol. RSC Advances, 6:44297-44304. PubMed | DOI

Ho-Yue-Kuang S, Alvarado C, Antelme S, Bouchet B, Cézard L, Le Bris P, Legée F, Maia-Grondard A, Yoshinaga A, Saulnier L, Guillon F, Sibout R, Lapierre C, Chateigner-Boutin AL (2016). Mutation in Brachypodium caffeic acid O-methyltransferase 6 alters stem and grain lignins and improves straw saccharification without deteriorating grain quality. J Exp Bot, 67:227-237. PubMed | DOI

Jaufurally AS, Teixeira ARS, Hollande L, Allais F, Ducrot PH (2016). Optimization of the Laccase-Catalyzed Synthesis of (±)-Syringaresinol and Study of its Thermal and Antiradical Activities. ChemistrySelect, 1:5165-5171. PubMed | DOI

Peru AA, Flourat AL, Gunawan C, Raverty W, Jevric M, Greatrex BW, Allais F (2016). Chemo-Enzymatic Synthesis of Chiral Epoxides Ethyl and Methyl (S)-3-(Oxiran-2-yl)propanoates from Renewable Levoglucosenone: An Access to Enantiopure (S)-Dairy Lactone. Molecules, 21:DOI:10.3390/molecules21080988. PubMed | DOI

Plasencia A, Soler M, Dupas A, Ladouce N, Silva-Martins G, Martinez Y, Lapierre C, Franche C, Truchet I, Grima-Pettenati J (2016). Eucalyptus hairy roots, a fast, efficient and versatile tool to explore function and expression of genes involved in wood formation. Plant Biotechnol J, 14:1381-1393. PubMed | DOI

Reano AF, Pion F, Domenek S, Ducrot PH, Allais F (2016). Chemo-enzymatic preparation and characterization of renewable oligomers with bisguaiacol moieties: promising sustainable antiradical/antioxidant additives. Green Chemistry, 18:3334-3345. PubMed | DOI

Sibout R, Le Bris P, Legée F, Cézard L, Renault H, Lapierre C (2016). Structural Redesigning Arabidopsis Lignins into Alkali-Soluble Lignins through the Expression of p-Coumaroyl-CoA:Monolignol Transferase PMT. Plant Physiol, 170:1358-1366. PubMed | DOI

Teixeira AR, Flourat AL, Peru AA, Brunissen F, Allais F (2016). Lipase-Catalyzed Baeyer-Villiger Oxidation of Cellulose-Derived Levoglucosenone into (S)-gamma-Hydroxymethyl-alpha,beta-Butenolide: Optimization by Response Surface Methodology. Front Chem, 4:16. PubMed | DOI

D'Andrea S (2016). Lipid droplet mobilization: The different ways to loosen the purse strings. Biochimie, 120:17-27. PubMed | DOI

Groeme R, Airouche S, Kopecný D, Jaekel J, Savko M, Berjont N, Bussieres L, Le Mignon M, Jagic F, Zieglmayer P, Baron-Bodo V, Bordas-Le Floch V, Mascarell L, Briozzo P, Moingeon P (2016). Structural and Functional Characterization of the Major Allergen Amb a 11 from Short Ragweed Pollen. J Biol Chem, 291:13076-13087. PubMed | DOI

Haili N, Louap J, Canonge M, Jagic F, Louis-Mondésir C, Chardot T, Briozzo P (2016). Expression of Soluble Forms of Yeast Diacylglycerol Acyltransferase 2 That Integrate a Broad Range of Saturated Fatty Acids in Triacylglycerols. PLoS One, 11:e0165431. PubMed | DOI

Hluska T, Dobrev PI, Tarkowska D, Frebortova J, Zalabák D, Kopecný D, Plihal O, Kokas F, Briozzo P, Zatloukal M, Motyka V, Galuszka P (2016). Cytokinin metabolism in maize: Novel evidence of cytokinin abundance, interconversions and formation of a new trans-zeatin metabolic product with a weak anticytokinin activity. Plant Sci, 247:127-137. PubMed | DOI

Kopecný D, Koncitíková R, Popelka H, Briozzo P, Vigouroux A, Kopecná M, Zalabák D, Sebela M, Skopalova J, Frebort I, Moréra S (2016). Kinetic and structural investigation of the cytokinin oxidase/dehydrogenase active site. FEBS J, 283:361-377. PubMed | DOI

Nisler J, Kopecný D, Koncitíková R, Zatloukal M, Bazgier V, Berka K, Zalabák D, Briozzo P, Strnad M, Spíchal L (2016). Novel thidiazuron-derived inhibitors of cytokinin oxidase/dehydrogenase. Plant Mol Biol, 92:235-248. PubMed | DOI

Boccaccini A, Lorrai R, Ruta V, Frey A, Boutet S, Marion-Poll A, Tarkowska D, Strnad M, Costantino P, Vittorioso P (2016). The DAG1 transcription factor negatively regulates the seed-to-seedling transition in Arabidopsis acting on ABA and GA levels. BMC Plant Biol, 16:198. PubMed | DOI

Dekkers BJ, He H, Hanson J, Willems LA, Jamar DC, Cueff G, Rajjou L, Hilhorst HW, Bentsink L (2016). The Arabidopsis DELAY OF GERMINATION 1 gene affects ABSCISIC ACID INSENSITIVE 5 (ABI5) expression and genetically interacts with ABI3 during Arabidopsis seed development. Plant J, 85:451-465. PubMed | DOI

Fendrych M, Leung J, Friml J (2016). TIR1/AFB-Aux/IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls. Elife, 5:e19048. PubMed | DOI

Griffiths JS, Crepeau MJ, Ralet MC, Seifert GJ, North HM (2016). Dissecting Seed Mucilage Adherence Mediated by FEI2 and SOS5. Front Plant Sci, 7:1073. PubMed | DOI

Leung J, Bazihizina N, Mancuso S, Valon C (2016). Revisiting the Plant's Dilemma. Mol Plant, 9:7-9. PubMed | DOI

Ralet MC, Crepeau MJ, Vigouroux J, Tran J, Berger A, Sallé C, Granier F, Botran L, North HM (2016). Xylans Provide the Structural Driving Force for Mucilage Adhesion to the Arabidopsis Seed Coat. Plant Physiol, 171:165-178. PubMed | DOI

Sano N, Rajjou L, North HM, Debeaujon I, Marion-Poll A, Seo M (2016). Staying Alive: Molecular Aspects of Seed Longevity. Plant Cell Physiol, 57:660-674. PubMed | DOI

Séchet J, Frey A, Effroy-Cuzzi D, Berger A, Perreau F, Cueff G, Charif D, Rajjou L, Mouille G, North HM, Marion-Poll A (2016). Xyloglucan Metabolism Differentially Impacts the Cell Wall Characteristics of the Endosperm and Embryo during Arabidopsis Seed Germination. Plant Physiol, 170:1367-1380. PubMed | DOI

Seo M, Kanno Y, Frey A, North HM, Marion-Poll A (2016). Dissection of Arabidopsis NCED9 promoter regulatory regions reveals a role for ABA synthesized in embryos in the regulation of GA-dependent seed germination. Plant Sci, 246:91-97. PubMed | DOI

Voiniciuc C, Zimmermann E, Schmidt MH, Gunl M, Fu L, North HM, Usadel B (2016). Extensive Natural Variation in Arabidopsis Seed Mucilage Structure. Front Plant Sci, 7:803. PubMed | DOI

Belcram K, Palauqui JC, Pastuglia M (2016). Studying Cell Division Plane Positioning in Early-Stage Embryos 2016. Methods Mol Biol, 1370:183-195. PubMed | DOI

Bure C, Cacas JL, Badoc A, Mongrand S, Schmitter JM (2016). Branched glycosylated inositolphosphosphingolipid structures in plants revealed by MS(3) analysis. J Mass Spectrom, 51:305-308. PubMed | DOI

De Bigault Du Granrut A, Cacas JL (2016). How Very-Long-Chain Fatty Acids Could Signal Stressful Conditions in Plants?. Front Plant Sci, 7:1490. PubMed | DOI

Faure JD, Tepfer M (2016). Camelina, a Swiss knife for plant lipid biotechnology. Ocl, 23:D503. PubMed | DOI

Hématy K, Bellec Y, Podicheti R, Bouteiller N, Anne P, Morineau C, Haslam RP, Beaudoin F, Napier JA, Mockaitis K, Gagliardi D, Vaucheret H, Lange H, Faure JD (2016). The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis. PLoS Genet, 12:e1005817. PubMed | DOI

Michaelson LV, Napier JA, Molino D, Faure JD (2016). Plant sphingolipids: Their importance in cellular organization and adaption. Biochim Biophys Acta, 1861:1329-1335. PubMed | DOI

Morineau C, Gissot L, Bellec Y, Hématy K, Tellier F, Renne C, Haslam R, Beaudoin F, Napier J, Faure JD (2016). Dual Fatty Acid Elongase Complex Interactions in Arabidopsis. PLoS One, 11:e0160631. PubMed | DOI

Baud S, Kelemen Z, Thévenin J, Boulard C, Blanchet S, To A, Payre M, Berger N, Effroy-Cuzzi D, Franco-Zorrilla JM, Godoy M, Solano R, Thevenon E, Parcy F, Lepiniec L, Dubreucq B (2016). Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed. Plant Physiol, 171:1099-1112. PubMed | DOI

Fatihi A, Boulard C, Bouyer D, Baud S, Dubreucq B, Lepiniec L (2016). Deciphering and modifying LAFL transcriptional regulatory network in seed for improving yield and quality of storage compounds. Plant Sci, 250:198-204. PubMed | DOI

Fiume E, De Klein N, Rhee SY, Magnani E (2016). A Framework for Discovering, Designing, and Testing MicroProteins to Regulate Synthetic Transcriptional Modules. Methods Mol Biol, 1482:175-188. PubMed | DOI

Fiume E, Guyon V, Remoue C, Magnani E, Miquel M, Grain D, Lepiniec L (2016). TWS1, a Novel Small Protein, Regulates Various Aspects of Seed and Plant Development. Plant Physiol, 172:1732-1745. PubMed | DOI

Kelemen Z, Przybyla-Toscano J, Tissot N, Lepiniec L, Dubos C (2016). Fast and Efficient Cloning of Cis-Regulatory Sequences for High-Throughput Yeast One-Hybrid Analyses of Transcription Factors. Methods Mol Biol, 1482:139-149. PubMed | DOI

Strenkert D, Limso CA, Fatihi A, Schmollinger S, Basset GJ, Merchant SS (2016). Genetically Programmed Changes in Photosynthetic Cofactor Metabolism in Copper-deficient Chlamydomonas. J Biol Chem, 291:19118-19131. PubMed | DOI

Thévenin J, Xu W, Vaisman L, Lepiniec L, Dubreucq B, Dubos C (2016). The Physcomitrella patens System for Transient Gene Expression Assays. Methods Mol Biol, 1482:151-161. PubMed | DOI

Troncoso-Ponce MA, Barthole G, Tremblais G, To A, Miquel M, Lepiniec L, Baud S (2016). Transcriptional Activation of Two Delta-9 Palmitoyl-ACP Desaturase Genes by MYB115 and MYB118 Is Critical for Biosynthesis of Omega-7 Monounsaturated Fatty Acids in the Endosperm of Arabidopsis Seeds. Plant Cell, 28:2666-2682. PubMed | DOI

Troncoso-Ponce MA, Nikovics K, Marchive C, Lepiniec L, Baud S (2016). New insights on the organization and regulation of the fatty acid biosynthetic network in the model higher plant Arabidopsis thaliana. Biochimie, 120:3-8. PubMed | DOI

Xu W, Fiume E, Coen O, Péchoux C, Lepiniec L, Magnani E (2016). Endosperm and Nucellus Develop Antagonistically in Arabidopsis Seeds. Plant Cell, 28:1343-1360. PubMed | DOI