Biomass, Seeds and Bioproducts

Thierry M, Majira A, Pégot B, Cézard L, Bourdreux F, Clément G, Perreau F, Boutet S, Diter P, Vo-Thanh G, Lapierre C, Ducrot PH, Magnier E, Baumberger S, Cottyn B (2018). Imidazolium-Based Ionic Liquids as Efficient Reagents for the C-O Bond Cleavage of Lignin. ChemSusChem, 11:439-448. PubMed | DOI

Ayme L, Arragain S, Canonge M, Baud S, Touati N, Bimai O, Jagic F, Louis-Mondésir C, Briozzo P, Fontecave M, Chardot T (2018). Arabidopsis thaliana DGAT3 is a [2Fe-2S] protein involved in TAG biosynthesis. Sci Rep, 8:17254. PubMed | DOI

Deruyffelaere C, Purkrtova Z, Bouchez I, Collet B, Cacas JL, Chardot T, Gallois JL, D'Andrea S (2018). PUX10 Is a CDC48A Adaptor Protein That Regulates the Extraction of Ubiquitinated Oleosins from Seed Lipid Droplets in Arabidopsis. Plant Cell, 30:2116-2136. PubMed | DOI

Rigouin C, Croux C, Borsenberger V, Ben Khaled M, Chardot T, Marty A, Bordes F (2018). Increasing medium chain fatty acids production in Yarrowia lipolytica by metabolic engineering. Microb Cell Fact, 17:142. PubMed | DOI

Sossna-Wunder G, Hengstenberg W, Briozzo P, Deutscher J (2018). Photoinactivation of the Staphylococcus aureus Lactose-Specific EIICB Phosphotransferase Component with p-azidophenyl-beta-D-Galactoside and Phosphorylation of the Covalently Bound Substrate. J Mol Microbiol Biotechnol, 28:147-158. PubMed | DOI

Francoz E, Lepiniec L, North HM (2018). Seed coats as an alternative molecular factory: thinking outside the box. Plant Reprod, 31:327-342. PubMed | DOI

Ingram G, North HM, Lepiniec L (2018). Seeds as perfect factories for developing sustainable agriculture. Plant Reprod, 31:201-202. PubMed | DOI

Séchet J, Marion-Poll A, North HM (2018). Emerging Functions for Cell Wall Polysaccharides Accumulated during Eudicot Seed Development. Plants, 7:. PubMed | DOI

Xia Q, Ponnaiah M, Cueff G, Rajjou L, Prodhomme D, Gibon Y, Bailly C, Corbineau F, Meimoun P, El-Maarouf-Bouteau H (2018). Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination. Plant Sci, 269:118-125. PubMed | DOI

Albert E, Duboscq R, Latreille M, Santoni S, Beukers M, Bouchet JP, Bitton F, Gricourt J, Poncet C, Gautier V, Jiménez-Gómez JM, Rigaill G, Causse M (2018). Allele-specific expression and genetic determinants of transcriptomic variations in response to mild water deficit in tomato. Plant J, 96:635-650. PubMed | DOI

Ashoub A, Muller N, Jiménez-Gómez JM, Bruggemann W (2018). Prominent alterations of wild barley leaf transcriptome in response to individual and combined drought acclimation and heat shock conditions. Physiol Plant, 163:18-29. PubMed | DOI

Muller NA, Zhang L, Koornneef M, Jiménez-Gómez JM (2018). Mutations in EID1 and LNK2 caused light-conditional clock deceleration during tomato domestication. Proc Natl Acad Sci U S A, 115:7135-7140. PubMed | DOI

Olate E, Jiménez-Gómez JM, Holuigue L, Salinas J (2018). NPR1 mediates a novel regulatory pathway in cold acclimation by interacting with HSFA1 factors. Nat Plants, 4:811-823. PubMed | DOI

Faure JD, Napier JA (2018). Europe's first and last field trial of gene-edited plants?. Elife, 7:e42379. PubMed | DOI

Sakai K, Taconnat L, Borrega N, Yansouni J, Brunaud V, Paysant-Le Roux C, Delannoy E, Martin-Magniette ML, Lepiniec L, Faure JD, Balzergue S, Dubreucq B (2018). Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo. Plant Methods, 14:10. PubMed | DOI

Zhang R, Chouket R, Plamont MA, Kelemen Z, Espagne A, Tebo AG, Gautier A, Gissot L, Faure JD, Jullien L, Croquette V, Le Saux T (2018). Macroscale fluorescence imaging against autofluorescence under ambient light. Light Sci Appl, 7:97. PubMed | DOI

Baud S (2018). Seeds as oil factories. Plant Reprod, 31:213-235. PubMed | DOI

Boulard C, Thévenin J, Tranquet O, Laporte V, Lepiniec L, Dubreucq B (2018). LEC1 (NF-YB9) directly interacts with LEC2 to control gene expression in seed. Biochim Biophys Acta Gene Regul Mech, 1861:443-450. PubMed | DOI

Coen O, Magnani E (2018). Seed coat thickness in the evolution of angiosperms. Cell Mol Life Sci, 75:2509-2518. PubMed | DOI

Ettaki H, Troncoso-Ponce MA, To A, Barthole G, Lepiniec L, Baud S (2018). Overexpression of MYB115, AAD2, or AAD3 in Arabidopsis thaliana seeds yields contrasting omega-7 contents. PLoS One, 13:e0192156. PubMed | DOI

Lepiniec L, Devic M, Roscoe TJ, Bouyer D, Zhou DX, Boulard C, Baud S, Dubreucq B (2018). Molecular and epigenetic regulations and functions of the LAFL transcriptional regulators that control seed development. Plant Reprod, 31:291-307. PubMed | DOI

Lu J, Magnani E (2018). Seed tissue and nutrient partitioning, a case for the nucellus. Plant Reprod, 31:309-317. PubMed | DOI

Magnani E (2018). Seed Evolution, A 'Simpler' Story. Trends Plant Sci, 23:654-656. PubMed | DOI

Troncoso-Ponce MA, Rivoal J, Dorion S, Sanchez R, Venegas-Caleron M, Moreno-Perez AJ, Baud S, Garces R, Martinez-Force E (2018). Molecular and biochemical characterization of the sunflower (Helianthus annuus L.) cytosolic and plastidial enolases in relation to seed development. Plant Sci, 272:117-130. PubMed | DOI

Chupin L, Arnoult S, Brancourt-Hulmel M, Lapierre C, Gineau E, Navard P (2017). Polyethylene composites made from below-ground miscanthus biomass. Industrial Crops and Products, 109:523-528. PubMed | DOI

Chupin L, Ridder D, Clément-Vidal A, Soutiras A, Gineau E, Mouille G, Arnoult S, Brancourt-Hulmel M, Lapierre C, Pot D, Vincent L, Mija A, Navard P (2017). Influence of the radial stem composition on the thermal behaviour of miscanthus and sorghum genotypes. Carbohydr Polym, 167:12-19. PubMed | DOI

Horbury MD, Quan WD, Flourat AL, Allais F, Stavros VG (2017). Elucidating nuclear motions in a plant sunscreen during photoisomerization through solvent viscosity effects. Phys Chem Chem Phys, 19:21127-21131. PubMed | DOI

Janvier M, Ducrot PH, Allais F (2017). Isocyanate-Free Synthesis and Characterization of Renewable Poly(hydroxy)urethanes from Syringaresinol. ACS Sustainable Chemistry & Engineering, 5:8648-8656. PubMed | DOI

Janvier M, Hollande L, Jaufurally AS, Pernes M, Menard R, Grimaldi M, Beaugrand J, Balaguer P, Ducrot PH, Allais F (2017). Syringaresinol: A Renewable and Safer Alternative to Bisphenol A for Epoxy-Amine Resins. ChemSusChem, 10:738-746. PubMed | DOI

Luo J, Liu Y, Yang S, Flourat AL, Allais F, Han K (2017). Ultrafast Barrierless Photoisomerization and Strong Ultraviolet Absorption of Photoproducts in Plant Sunscreens. J Phys Chem Lett, 8:1025-1030. PubMed | DOI

Sibout R, Proost S, Hansen BO, Vaid N, Giorgi FM, Ho-Yue-Kuang S, Legée F, Cezart L, Bouchabké-Coussa O, Soulhat C, Provart N, Pasha A, Le Bris P, Roujol D, Höfte H, Jamet E, Lapierre C, Persson S, Mutwil M (2017). Expression atlas and comparative coexpression network analyses reveal important genes involved in the formation of lignified cell wall in Brachypodium distachyon. New Phytol, 215:1009-1025. PubMed | DOI

Soler M, Plasencia A, Larbat R, Pouzet C, Jauneau A, Rivas S, Pesquet E, Lapierre C, Truchet I, Grima-Pettenati J (2017). The Eucalyptus linker histone variant EgH1.3 cooperates with the transcription factor EgMYB1 to control lignin biosynthesis during wood formation. New Phytol, 213:287-299. PubMed | DOI

Van Acker R, Déjardin A, Desmet S, Hoengenaert L, Vanholme R, Morreel K, Laurans F, Kim H, Santoro N, Foster C, Goeminne G, Legée F, Lapierre C, Pilate G, Ralph J, Boerjan W (2017). Different Routes for Conifer- and Sinapaldehyde and Higher Saccharification upon Deficiency in the Dehydrogenase CAD1. Plant Physiol, 175:1018-1039. PubMed | DOI

Voxeur A, Soubigou-Taconnat L, Legée F, Sakai K, Antelme S, Durand-Tardif M, Lapierre C, Sibout R (2017). Altered lignification in mur1-1 a mutant deficient in GDP-L-fucose synthesis with reduced RG-II cross linking. PLoS One, 12:e0184820. PubMed | DOI

Zhang M, Lapierre C, Nouxman NL, Nieuwoudt MK, Smith BG, Chavan RR, Mcardle BH, Harris PJ (2017). Location and characterization of lignin in tracheid cell walls of radiata pine (Pinus radiata D. Don) compression woods. Plant Physiol Biochem, 118:187-198. PubMed | DOI

Baud A, Ayme L, Gonnet F, Salard I, Gohon Y, Jolivet P, Brodolin K, Da Silva P, Giuliani A, Sclavi B, Chardot T, Mercere P, Roblin P, Daniel R (2017). SOLEIL shining on the solution-state structure of biomacromolecules by synchrotron X-ray footprinting at the Metrology beamline. J Synchrotron Radiat, 24:576-585. PubMed | DOI

Jolivet P, Ayme L, Giuliani A, Wien F, Chardot T, Gohon Y (2017). Structural proteomics: Topology and relative accessibility of plant lipid droplet associated proteins. J Proteomics, 169:87-98. PubMed | DOI

Kopecná M, Vigouroux A, Vilim J, Koncitíková R, Briozzo P, Hajkova E, Jaskova L, Von Schwartzenberg K, Sebela M, Moréra S, Kopecný D (2017). The ALDH21 gene found in lower plants and some vascular plants codes for a NADP(+) -dependent succinic semialdehyde dehydrogenase. Plant J, 92:229-243. PubMed | DOI

Chedraoui S, Abi-Rizk A, El Beyrouthy M, Chalak L, Ouaini N, Rajjou L (2017). Capparis spinosa L. in A Systematic Review: A Xerophilous Species of Multi Values and Promising Potentialities for Agrosystems under the Threat of Global Warming. Front Plant Sci, 8:1845. PubMed | DOI

Galland M, He D, Lounifi I, Arc E, Clément G, Balzergue S, Huguet S, Cueff G, Godin B, Collet B, Granier F, Morin H, Tran J, Valot B, Rajjou L (2017). An Integrated "Multi-Omics" Comparison of Embryo and Endosperm Tissue-Specific Features and Their Impact on Rice Seed Quality. Front Plant Sci, 8:1984. PubMed | DOI

Griffiths JS, North HM (2017). Sticking to cellulose: exploiting Arabidopsis seed coat mucilage to understand cellulose biosynthesis and cell wall polysaccharide interactions. New Phytol, 214:959-966. PubMed | DOI

Larson ER, Van Zelm E, Roux C, Marion-Poll A, Blatt MR (2017). Clathrin Heavy Chain Subunits Coordinate Endo- and Exocytic Traffic and Affect Stomatal Movement. Plant Physiol, 175:708-720. PubMed | DOI

Leung J (2017). The First Broad-Spectrum Abscisic Acid Antagonist. Plant Physiol, 173:1939. PubMed | DOI

Villegente M, Marmey P, Job C, Galland M, Cueff G, Godin B, Rajjou L, Balliau T, Zivy M, Fogliani B, Sarramegna-Burtet V, Job D (2017). A Combination of Histological, Physiological, and Proteomic Approaches Shed Light on Seed Desiccation Tolerance of the Basal Angiosperm Amborella trichopoda. Proteomes, 5:19. PubMed | DOI

Magnani E, Jiménez-Gómez JM, Soubigou-Taconnat L, Lepiniec L, Fiume E (2017). Profiling the onset of somatic embryogenesis in Arabidopsis. BMC Genomics, 18:998. PubMed | DOI

Serin EaR, Snoek LB, Nijveen H, Willems LaJ, Jiménez-Gómez JM, Hilhorst HWM, Ligterink W (2017). Construction of a High-Density Genetic Map from RNA-Seq Data for an Arabidopsis Bay-0 x Shahdara RIL Population. Front Genet, 8:201. PubMed | DOI

Soyk S, Muller NA, Park SJ, Schmalenbach I, Jiang K, Hayama R, Zhang L, Van Eck J, Jiménez-Gómez JM, Lippman ZB (2017). Variation in the flowering gene SELF PRUNING 5G promotes day-neutrality and early yield in tomato. Nat Genet, 49:162-168. PubMed | DOI

Cacas JL, Pre M, Pizot M, Cissoko M, Diedhiou I, Jalloul A, Doumas P, Nicole M, Champion A (2017). GhERF-IIb3 regulates the accumulation of jasmonate and leads to enhanced cotton resistance to blight disease. Mol Plant Pathol, 18:825-836. PubMed | DOI

Dolch LJ, Rak C, Perin G, Tourcier G, Broughton R, Leterrier M, Morosinotto T, Tellier F, Faure JD, Falconet D, Jouhet J, Sayanova O, Beaudoin F, Marechal E (2017). A Palmitic Acid Elongase Affects Eicosapentaenoic Acid and Plastidial Monogalactosyldiacylglycerol Levels in Nannochloropsis. Plant Physiol, 173:742-759. PubMed | DOI

Kalmbach L, Hématy K, De Bellis D, Barberon M, Fujita S, Ursache R, Daraspe J, Geldner N (2017). Transient cell-specific EXO70A1 activity in the CASP domain and Casparian strip localization. Nat Plants, 3:17058. PubMed | DOI